Tampere University of Technology

TUTCRIS Research Portal

Department of Signal Processing

Research unit: Department

  1. Article › Scientific › Peer-reviewed
  2. Published

    Distant speech separation using predicted time-frequency masks from spatial features

    Pertilä, P. & Nikunen, J., 2015, In : Speech Communication. 68, p. 97-106 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  3. Published

    Distinguishing key biological pathways between primary breast cancers and their lymph node metastases by gene function-based clustering analysis

    Lähdesmäki, H., Hao, X., Sun, B., Hu, L., Yli-Harja, O., Shmulevich, I. & Zhang, W., 2004, In : International Journal of Oncology. 24, 6, p. 1589-1596

    Research output: Contribution to journalArticleScientificpeer-review

  4. Published

    Diversity of temporal correlations between genes in models of noisy and noiseless gene networks

    Ribeiro, A. S., Lloyd-Price, J., Chowdhury, S. & Yli-Harja, O., 2011, In : Biosystems. 104, 2-3, p. 136-144

    Research output: Contribution to journalArticleScientificpeer-review

  5. Published

    DNA sequence compression

    Korodi, G., Tabus, I., Rissanen, J. & Astola, J., 2007, In : IEEE Signal Processing Magazine. 24, 1, p. 47-53

    Research output: Contribution to journalArticleScientificpeer-review

  6. Published

    Dominant Rotated Local Binary Patterns (DRLBP) for texture classification

    Mehta, R. & Egiazarian, K., 2016, In : Pattern Recognition Letters. 71, p. 16-22 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  7. Published

    DOT1L -HES6 fusion drives androgen independent growth in prostate cancer

    Annala, M., Kivinummi, K., Leinonen, K., Tuominen, J., Zhang, W., Visakorpi, T. & Nykter, M., 2014, In : EMBO Molecular Medicine. 6, p. 1121-1123 4 p.

    Research output: Contribution to journalArticleScientificpeer-review

  8. Published

    Draft genome sequence of the hydrogen- and ethanol-producing anaerobic alkalithermophilic bacterium Caloramator celer.

    Ciranna, A., Larjo, A., Kivistö, A., Santala, V., Roos, C. & Karp, M., 2013, In : Genome Announcements. 1, 4, p. 1-2 2 p.

    Research output: Contribution to journalArticleScientificpeer-review

  9. Published

    DSP system integration and prototyping with FPGAs

    Isoaho, J., Pasanen, J., Vainio, O. & Tenhunen, H., 1993, In : Journal of VLSI Signal Processing. 6, 2 Aug., p. 155-172

    Research output: Contribution to journalArticleScientificpeer-review

  10. Published

    DVC Decompression With Denoising for Picture Quality Improvement

    Ben Dhaou, I. & Defee, I., 1997, In : IEEE Transactions on Consumer Electronics. 43, 3, p. 911-917

    Research output: Contribution to journalArticleScientificpeer-review

  11. Published

    Dynamic agent-based model of hand-preference behavior patterns in the mouse

    S. Ribeiro, A., Lloyd-Price, J., Eales, B. A. & Biddle, F. G., 2010, In : Adaptive Behavior. 18, 2, p. 116-131

    Research output: Contribution to journalArticleScientificpeer-review

  12. Published

    Dynamical effects of transcriptional pause-prone sites

    S. Ribeiro, A., Häkkinen, A., Healy, S. & Yli-Harja, O., 2010, In : Computational Biology and Chemistry. 34, 3, p. 143-148

    Research output: Contribution to journalArticleScientificpeer-review

  13. Published

    Dynamic analysis of MAPK signaling using a high-throughput microfluidic single-cell imaging platform

    Taylor, R. J., Falconnet, D., Niemistö, A., Ramsey, S. A., Prinz, S., Shmulevich, I., Galitski, T. & Hansen, C. L., 2009, In : Proceedings of the National Academy of Sciences of the United States of America. 106, 10, p. 3758-3763

    Research output: Contribution to journalArticleScientificpeer-review

  14. Published

    Dynamic and scalable audio classification by collective network of binary classifiers framework: An evolutionary approach

    Kiranyaz, S., Mäkinen, T. & Gabbouj, M., 2012, In : Neural Networks. 34, p. 80-95

    Research output: Contribution to journalArticleScientificpeer-review

  15. Published

    Dynamic data clustering using stochastic approximation driven multi-dimensionla particle swarm optimization

    Kiranyaz, S., Ince, T. & Gabbouj, M., 2010, In : Lecture Notes in Computer Science. 6024, p. 336-343

    Research output: Contribution to journalArticleScientificpeer-review

  16. Published

    Dynamic Queries with Relevance Feedback for Content Based Image Retrieval

    Birinci, M., Guldogan, E. & Gabbouj, M., 2011, In : Lecture Notes in Computer Science. 6761, p. 547-554

    Research output: Contribution to journalArticleScientificpeer-review

  17. Published

    Dynamics and evolution of stochastic bistable gene networks with sensisng in fluctuating environments

    S. Ribeiro, A., 2008, In : Physical Review E. 78, 6, 061902, p. 9 p

    Research output: Contribution to journalArticleScientificpeer-review

  18. Published

    Dynamics of genetic toggle switch at the nucleotide and codon levels

    Potapov, I., Lloyd-Price, J., Yli-Harja, O. & Ribeiro, A. S., 2011, In : Physical Review E. 84, 3, p. 1-9 9 p., 031903.

    Research output: Contribution to journalArticleScientificpeer-review

  19. Published

    Dynamics of small genetic circuits subject to stochastic partitioning in cell division

    Lloyd-Price, J., Tran, H. & Ribeiro, A. S., 2014, In : Journal of Theoretical Biology. 356, p. 11-19 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  20. Published

    Dynamics of transcription driven by the tetA promoter, one event at a time, in live Escherichia coli cells

    Muthukrishnan, A., Kandhavelu, M., Lloyd-Price, J., Kudasov, F., Chowdhury, S., Yli-Harja, O. & Ribeiro, A. S., 2012, In : Nucleic Acids Research. 40, 17, p. 8472-8483

    Research output: Contribution to journalArticleScientificpeer-review

  21. Published

    Dynamics of Transcription of Closely Spaced Promoters in Escherichia coli, One Event at a Time

    Martins, L., Mäkelä, J., Häkkinen, A., Kandhavelu, M., Yli-Harja, O., Fonseca, J. & Ribeiro, A., 2012, In : Journal of Theoretical Biology. 301, p. 83-94

    Research output: Contribution to journalArticleScientificpeer-review

  22. Published

    ECG data compression by spline approximation

    Karczewicz, M. & Gabbouj, M., 1997, In : Signal Processing. 59, p. 43-59

    Research output: Contribution to journalArticleScientificpeer-review

  23. Published

    Editorial: Special issue on soft computing in multimedia processing

    Egiazarian, K. & Hassanien, A. E., 2005, In : Informatica, an International Journal of Computing and Informatics. 29, 3, p. 251-252

    Research output: Contribution to journalArticleScientificpeer-review

  24. Published

    Effect of atropine on the QT interval and T-Wave amplitude in healthy volunteers

    Annila, P., Yli-Hankala, A. & Lindgren, L., 1993, In : British Journal of Anaesthesia. 71

    Research output: Contribution to journalArticleScientificpeer-review

  25. Published

    Effects of Codon Sequence on the Dynamics of Genetic Networks

    Potapov, I., Mäkelä, J., Yli-Harja, O. & Ribeiro, A. S., 2012, In : Journal of Theoretical Biology. 315, p. 17-25

    Research output: Contribution to journalArticleScientificpeer-review

  26. Published

    Effects of Gene Length on the Dynamics of Gene Expression

    Ribeiro, A. S., Häkkinen, A. & Lloyd-Price, J., 2012, In : Computational Biology and Chemistry. 41, p. 1-9 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  27. Published

    Effects of Herceptin treatment on global gene expression patterns in HER2-amplified and nonamplified breast cancer cell lines

    Kauraniemi, P., Hautaniemi, S., Autio, R., Astola, J., Monni, O., Elkahloun, A. & Kallioniemi, A., 2004, In : Oncogene. 23, 4, p. 1010-1013

    Research output: Contribution to journalArticleScientificpeer-review

  28. Published

    Effects of latanoprost in iris bioidentification

    Lamminen, H., Voipio, V., Manninen, T. & Huttunen, H., 2009, In : Acta Ophthalmologica. 87, 5, p. 529-531

    Research output: Contribution to journalArticleScientificpeer-review

  29. Published

    Effects of Mg2+ on in vivo transcriptional dynamics of the lar promoter

    Kandhavelu, M., Lihavainen, E., Muthukrishnan, A., Yli-Harja, O. & Ribeiro, A., 2012, In : Biosystems. 107, 3, p. 129-134

    Research output: Contribution to journalArticleScientificpeer-review

  30. Published

    Effects of microarray noise on inference efficiency of a stochastic model of gene networks

    Charlebois, D. A., S. Ribeiro, A., Lehmussola, A., Lloyd-Price, J., Yli-Harja, O. & Kauffman, S. A., 2007, In : WSEAS Transactions on Biology and Biomedicine. 4, 2, p. 15-21

    Research output: Contribution to journalArticleScientificpeer-review

  31. Published

    Effects of Rate-Limiting Steps in Transcription Initiation on Genetic Filter Motifs

    Häkkinen, A., Tran, H., Yli-Harja, O. & Ribeiro, A. S., 2013, In : PLoS ONE. 8, 8, p. 1-9 9 p., e70439.

    Research output: Contribution to journalArticleScientificpeer-review

  32. Published

    Effects of spatial smoothing on inter-subject correlation based analysis of FMRI

    Pajula, J. & Tohka, J., 2014, In : Magnetic Resonance Imaging. 32, 9, p. 1114-1124 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  33. Published

    Effects of subsampling on characteristics of RNA‑seq data from triple‑negative breast cancer patients

    Stupnikov, A., Glazko, G. V. & Emmert-Streib, F., 8 Sep 2015, In : Chinese Journal of Cancer. 34, 10

    Research output: Contribution to journalArticleScientificpeer-review

  34. Published

    Effects of temperature on the dynamics of the LacI-TetR-CI repressilator

    Chandraseelan, J. G., Oliveira, S. M. D., Häkkinen, A., Tran, H., Potapov, I., Sala, A., Kandhavelu, M. & Ribeiro, A. S., 2013, In : Molecular Biosystems. 9, 12, p. 3117-3123 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  35. Published

    Effects of the promoter open complex formation on gene expression dynamics

    S. Ribeiro, A., Häkkinen, A., Mannerström, H., Lloyd-Price, J. & Yli-Harja, O., 2010, In : Physical Review E. 81, 1, 0119129, p. 1-5 5 p.

    Research output: Contribution to journalArticleScientificpeer-review

  36. Published

    Effects of transcriptional pausing on gene expression dynamics

    Rajala, T., Häkkinen, A., Healy, S., Yli-Harja, O. & S. Ribeiro, A., 2010, In : PLoS Computational Biology. 6, 3, p. 1-12 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  37. Published

    Effects of Transmitters and Amyloid-Beta Peptide on Calcium Signals in Rat Cortical Astrocytes: Fura-2AM Measurements and Stochastic Model Simulations

    Toivari, E., Manninen, T., Nahata, A. K., Jalonen, T. O. & Linne, M-L., 2011, In : PLoS ONE. 6, 3, p. 1-9 9 p., e17914.

    Research output: Contribution to journalArticleScientificpeer-review

  38. Published

    Effects of σ factor competition are promoter initiation kinetics dependent

    Kandavalli, V. K., Tran, H. & Ribeiro, A. S., 1 Oct 2016, In : Biochimica et Biophysica Acta: Gene Regulatory Mechanisms. 1859, 10, p. 1281-1288 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  39. Published

    Efficiency analysis of color image filtering

    Fevralev, D. V., Ponomarenko, N. N., Lukin, V. V., Abramov, S. K., Egiazarian, K. & Astola, J. T., 2011, In : Eurasip Journal on Advances in Signal Processing. 19 p., 41.

    Research output: Contribution to journalArticleScientificpeer-review

  40. Published

    Efficiency analysis of sar-image compression methods

    Egiazarian, K., Zelensky, A. A., Lukin, V. V. & Ponomarenko, N. N., 2002, In : Electromagnetic Waves and Electronic Systems. 7, 7, p. 23-32

    Research output: Contribution to journalArticleScientificpeer-review

  41. Published

    Efficiency of texture image enhancement by DCT-based filtering

    Rubel, A., Lukin, V., Uss, M., Vozel, B., Pogrebnyak, O. & Egiazarian, K., 2015, In : Neurocomputing. 175, p. 948-965

    Research output: Contribution to journalArticleScientificpeer-review

  42. Published

    Efficiency of texture image filtering and its prediction

    Rubel, O., Lukin, V., Abramov, S., Vozel, B., Egiazarian, K. & Pogrebnyak, O., 2016, In : Signal, Image and Video Processing. 10, 8, p. 1543–1550 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  43. Published

    Efficient Fourier shape descriptor for industrial defect images using wavelelts

    Kunttu, I., Lepistö, L. & Visa, A., 2005, In : Optical Engineering. 44, 8, p. 3 p

    Research output: Contribution to journalArticleScientificpeer-review

  44. Published

    Efficient implementation of adaptive interpolation filters for low complexity video coding

    Ugur, K., Rusanovskyy, D., Hallapuro, A., Lainema, J. & Gabbouj, M., 2009, In : IEEE Transactions on Consumer Electronics. 55, 1, p. 257-263

    Research output: Contribution to journalArticleScientificpeer-review

  45. Published

    Efficient Nonlinear Transform Methods for Image Processing

    Atourian, S., Gevorkian, D., Egiazarian, K. & Astola, J., 1996, In : Journal of Electronic Imaging. 5, 3, p. 323-334

    Research output: Contribution to journalArticleScientificpeer-review

  46. Published

    Efficient scalable DCT block-based image coder with compression of signs of DCT coefficients

    Bazhyna, A. V., Ponomarenko, N. N., Egiazarian, K. O. & Lukin, V. V., 2008, In : Telecommunications and Radio Engineering. 67, 5, p. 391-412

    Research output: Contribution to journalArticleScientificpeer-review

  47. Published

    Efficient state-space approach for FIR filter bank completion

    Popeaa, C., Dumitrescu, B. & Jora, B., 2003, In : Signal Processing. 83, 9, p. 1973-1983

    Research output: Contribution to journalArticleScientificpeer-review

  48. Published

    E=MC2+1: A fully digital, collaborative, high-definition (HD) pruduction from scene to screen

    Lugmayr, A., Hornsby, A., Golebiowski, P., Jumisko-Pyykkö, S., Ubis, F., Reymann, S., Bruns, V., Kybartaite, A., Kauranen, J. & Matthes, D., 2008, In : Computers in Entertainment. 6, 2, p. 33 p

    Research output: Contribution to journalArticleScientificpeer-review

  49. Published

    Energy Efficient Wireless Sensor Networks Using Linear-Programming Optimization of the Communication Schedule

    Tabus, V., Moltchanov, D., Koucheryavy, Y., Tabus, I. & Astola, J., Apr 2015, In : Journal of Communications and Networks. 17, 2, p. 184-197 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  50. Published

    Enhanced Fourier shape descriptor using zero-padding

    Kunttu, I., Lepistö, L. & Visa, A., 2005, In : Lecture Notes in Computer Science. 3540, p. 892-900

    Research output: Contribution to journalArticleScientificpeer-review

  51. Published

    Entropy of weighted graphs with Randić weights

    Chen, Z., Dehmer, M., Emmert-Streib, F. & Shi, Y., 2015, In : Entropy. 17, 6, p. 3710-3723 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

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