Tampere University of Technology

TUTCRIS Research Portal

Department of Signal Processing

Research unit: Department

  1. A1 Journal article-refereed
  2. Published

    Discrimination Power of Polynomial-Based Descriptors for Graphs by Using Functional Matrices

    Dehmer, M., Emmert-Streib, F., Shi, Y., Stefu, M. & Tripathi, S., 2015, In : PLoS ONE. 10, 10, e0139265.

    Research output: Contribution to journalArticleScientificpeer-review

  3. Published

    On the Kernel Extreme Learning Machine speedup

    Iosifidis, A. & Gabbouj, M., 2015, In : Pattern Recognition Letters. 68, Part 1, p. 205-210 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  4. Published

    Constrained Directed Graph Clustering and Segmentation Propagation for Multiple Foregrounds Cosegmentation

    Meng, F., Li, H., Zhu, S., Luo, B., Zeng, B. & Gabbouj, M., 2015, In : IEEE Transactions on Circuits and Systems for Video Technology. 25, 11, p. 1735-1748 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  5. Published

    A New R-D Optimization Criterion for Fast Mode Decision Algorithms in Video Coding and Transrating

    Aminlou, A., Hashemi, M. R., Gabbouj, M., Zeng, B. & Fatemi, O., 2015, In : IEEE Transactions on Circuits and Systems for Video Technology. 26, 4, p. 696-710

    Research output: Contribution to journalArticleScientificpeer-review

  6. Published

    In silico analysis of division times of Escherichia coli populations as a function of the partitioning scheme of non-functional proteins

    Gupta, A., Lloyd-Price, J. & Ribeiro, A. S., 2015, In : In Silico Biology. 1, 2, p. 9-21

    Research output: Contribution to journalArticleScientificpeer-review

  7. Published

    Efficiency of texture image enhancement by DCT-based filtering

    Rubel, A., Lukin, V., Uss, M., Vozel, B., Pogrebnyak, O. & Egiazarian, K., 2015, In : Neurocomputing. 175, p. 948-965

    Research output: Contribution to journalArticleScientificpeer-review

  8. Published

    Monitoring urban air quality with a diffusion charger based electrical particle sensor

    Järvinen, A., Kuuluvainen, H., Niemi, J. V., Saari, S., Dal Maso, M., Pirjola, L., Hillamo, R., Janka, K., Keskinen, J. & Rönkkö, T., 2015, In : Urban Climate. 14, 3

    Research output: Contribution to journalArticleScientificpeer-review

  9. Published

    Fixed-Pattern Noise Modeling and Removal in Time-of-Flight Sensing

    Georgiev, M., Bregovic, R. & Gotchev, A., 2015, In : IEEE Transactions on Instrumentation and Measurement. 65, 4, p. 808-820

    Research output: Contribution to journalArticleScientificpeer-review

  10. Published

    Women in technology-oriented fields

    Niiranen, S. & Niiranen, S., 2015, In : Australasian Journal of Technology Education. 2

    Research output: Contribution to journalArticleScientificpeer-review

  11. Published

    Analysis of dct spectrum statistics for image processing applications

    Lukin, V., Abramov, S., Roenko, A., Astola, J. & Egiazarian, K., 2015, In : Telecommunications and Radio Engineering. 74, 12, p. 1051-1070 20 p.

    Research output: Contribution to journalArticleScientificpeer-review

  12. Published

    Detection and Segmentation of Nucleoids Based on Gradient Path Labelling

    Santinha, J., Mora, A. D., Fonseca, J., Goncalves, N. & Ribeiro, A. S., 2015, In : International Journal of Pharma Medicine and Biological Sciences. 4, 1, p. 51-55 5 p.

    Research output: Contribution to journalArticleScientificpeer-review

  13. Published

    An investigation of nuclear properties of even-even natural Mo92-100 isotopes

    Artun, O., Aytekin, C. & Aytekin, H., 21 Dec 2014, In : Modern Physics Letters A. 29, 39, 11 p., 1450208.

    Research output: Contribution to journalArticleScientificpeer-review

  14. Published

    Compensation of Missing Wedge Effects with Sequential Statistical Reconstruction in Electron Tomography

    Paavolainen, L., Acar, E., Tuna, U., Peltonen, S., Moriya, T., Soonsawad, P., Marjomaki, V., Cheng, R. H. & Ruotsalainen, U., 3 Oct 2014, In : PLoS ONE. 9, 10, 14 p., 108978.

    Research output: Contribution to journalArticleScientificpeer-review

  15. Published

    Quantitative Analysis of Dynamic Association in Live Biological Fluorescent Samples

    Ruusuvuori, P., Paavolainen, L., Rutanen, K., Maki, A., Huttunen, H. & Marjomaki, V., 11 Apr 2014, In : PLoS ONE. 9, 4, 11 p., 94245.

    Research output: Contribution to journalArticleScientificpeer-review

  16. Published

    Weight Rhythms: Weight Increases during Weekends and Decreases during Weekdays

    Orsama, A-L., Mattila, E., Ermes, M., van Gils, M., Wansink, B. & Korhonen, I., Feb 2014, In : Obesity Facts. 7, 1, p. 36-47 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  17. Published

    Fast Fourier Transforms on Finite Groups as a method in Synthesis for Regularity

    Stankovic, R. S., Astola, J. & Moraga, C., 2014, In : Journal of Multiple-Valued Logic and Soft Computing. 23, 5-6, p. 463-483 20 p.

    Research output: Contribution to journalArticleScientificpeer-review

  18. Published

    A perceptual scheme for fully automatic video shot boundary detection

    Birinci, M. & Kiranyaz, S., 2014, In : Signal Processing: Image Communication. 29, 3, p. 410-423 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  19. Published

    Direction of Arrival Based Spatial Covariance Model for Blind Sound Source Separation

    Nikunen, J. & Virtanen, T., 2014, In : IEEE Transactions on Audio Speech and Language Processing. 22, 3, p. 727-739 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  20. Published

    Dynamics of small genetic circuits subject to stochastic partitioning in cell division

    Lloyd-Price, J., Tran, H. & Ribeiro, A. S., 2014, In : Journal of Theoretical Biology. 356, p. 11-19 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  21. Published

    Online PLSA: Batch Updating Techniques Including Out-of-Vocabulary Words

    Bassiou, N. K. & Kotropoulos, C. L., 2014, In : IEEE Transactions on Neural Networks and Learning Systems . 25, 11, p. 1953-1966 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  22. Published

    Live RGB-D camera tracking for television production studios

    Tykkälä, T., Comport, A. I., Kämäräinen, J-K. & Hartikainen, H., 2014, In : Journal of Visual Communication and Image Representation. 25, p. 207-217 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  23. Published

    Simultaneous 2D and 3D perception for stereoscopic displays based on polarized or active shutter glasses

    Aflaki, P., Hannuksela, M. M., Sarbolandi, H. & Gabbouj, M., 2014, In : Journal of Visual Communication and Image Representation. 25, 4, p. 622-631 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  24. Published

    Hybrid and Rogue Kinases Encoded in the Genomes of Model Eukaryotes

    Rakshambikai, R., Mutharasu, G. & Srnivasan, N., 2014, In : PLoS ONE. 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  25. Published

    In Vivo Transcription Kinetics of a Synthetic Gene Uninvolved in Stress-Response Pathways in Stressed Escherichia coli Cells

    Muthukrishnan, A-B., Martikainen, A., Neeli-Venkata, R. & S. Ribeiro, A., 2014, In : PLoS ONE. p. 1-9 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  26. Published

    Joint Removal of Random and Fixed-Pattern Noise Through Spatiotemporal Video Filtering

    Maggioni, M., Sanchez-Monge, E. & Foi, A., 2014, In : IEEE Transactions on Image Processing. 23, 10, p. 4282-4296 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  27. Published

    Towards an Unbiased Comparison of CC, BCC, and FCC Lattices in Terms of Prealiasing

    Vad, V., Csebfalvi, B., Rautek, P. & Gröller, E., 2014, In : Computer Graphics Forum. 33, 3, p. 81-90 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  28. Published

    Evaluating the performance of artificial neural networks for the classification of freshwater benthic macroinvertebrates

    Joutsijoki, H., Meissner, K., Gabbouj, M., Kiranyaz, S., Raitoharju, J., Ärje, J., Kärkkäinen, S., Tirronen, V., Turpeinen, T. & Juhola, M., 2014, In : Ecological Informatics. 20, p. 1-12 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  29. Published

    On the relation between the randomized extended Kaczmarz algorithm and coordinate descent

    Dumitrescu, B., 2014, In : Bit Numerical Mathematics.

    Research output: Contribution to journalArticleScientificpeer-review

  30. Published

    Patch-Based Conditional Context Coding of Stereo Disparity Images

    Tabus, I., 2014, In : IEEE Signal Processing Letters. 21, 10, p. 1220-1224 5 p.

    Research output: Contribution to journalArticleScientificpeer-review

  31. Published

    The use of Crowdsourcing for dietary self-monitoring: crowdsourced ratings of food pictures are comparable to ratings by trained observers

    Turner-McGrievy, G., Helander, E., Kaipainen, K., Perez-Macias, J. M. & Korhonen, I., 2014, In : Journal of the American Medical Informatics Association. 7, p. 1-8 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  32. Published

    Automated patient-specific classification of long-term Electroencephalography

    Kiranyaz, S., Ince, T., Zabihi, M. & Ince, D., 2014, In : Journal of Biomedical Informatics. 49, Jun, p. 16-31 15 p.

    Research output: Contribution to journalArticleScientificpeer-review

  33. Published

    On required accuracy of mixed noise parameter estimation for image enhancement via denoising

    Abramova, V. V., Abramov, S. K., Lukin, V. V., Egiazarian, K. O. & Astola, J. T., 2014, In : Eurasip Journal on Image and Video Processing. January, p. 1-16 16 p., 3.

    Research output: Contribution to journalArticleScientificpeer-review

  34. Published

    Integrating Color Features in Polarimetric SAR Image Classification

    Uhlmann, S. & Kiranyaz, S., 2014, In : IEEE Transactions on Geoscience and Remote Sensing. 52, 4, p. 2197-2216 20 p.

    Research output: Contribution to journalArticleScientificpeer-review

  35. Published

    Astrocyte-neuron interactions: From experimental research-based models to translational medicine

    Linne, M. L. & Jalonen, T. O., 2014, In : Progress in Molecular Biology and Translational Science. 123, p. 191-217 27 p.

    Research output: Contribution to journalArticleScientificpeer-review

  36. Published

    Classification of dual- and single polarized SAR images by incorporating visual features

    Uhlmann, S. & Kiranyaz, S., 2014, In : ISPRS Journal of Photogrammetry and Remote Sensing. 90, p. 10-22 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  37. Published

    Objectively measured physical activity in Finnish employees: a cross-sectional study

    Mutikainen, S., Helander, E., Pietilä, J., Korhonen, I. & Kujala, U. M., 2014, In : BMJ Open. 4, 12, e005927.

    Research output: Contribution to journalArticleScientificpeer-review

  38. Published

    Integrative genomics and transcriptomics analysis of human embryonic and induced pluripotent stem cells

    Laurila, K., Autio, R., Kong, L., Närvä, E., Hussein, S., Otonkoski, T., Lahesmaa, R. & Lähdesmäki, H., 2014, In : BioData Mining. p. 1-24 24 p.

    Research output: Contribution to journalArticleScientificpeer-review

  39. Published

    Gut-adipose tissue axis in hepatic fat accumulation in humans

    Munukka, E., Pekkala, S., Wiklund, P., Rasool, O., Borra, R., Kong, L., Ojanen, X., Cheng, S. M., Roos, C., Tuomela, S., Alen, M., Lahesmaa, R. & Cheng, S., 2014, In : Journal of Hepatology. 61, 1, p. 132-138 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  40. Published

    Perceptual Encryption of H.264 Videos: Embedding Sign-Flips Into the Integer-Based Transforms

    Zeng, B., Au Yeung, S-K., Zhu, S. & Gabbouj, M., 2014, In : IEEE Transactions on Information Forensics and Security. 9, 2, p. 309-320 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  41. Published

    Are breaks in daily Self-Weighing Associated with Weight Gain

    Helander, E. E., Vuorinen, A-L., Wansink, B. & Korhonen, I. K. J., 2014, In : PLoS ONE. 9, 11, p. 1-4 4 p., 113164.

    Research output: Contribution to journalArticleScientificpeer-review

  42. Published

    Face recognition using scale-adaptive directional and textural features

    Mehta, R., Yuan, J. & Egiazarian, K., 2014, In : Pattern Recognition. 47, 5, p. 1846-1858 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  43. Published

    Classification of aircraft using micro-Doppler bicoherence-based features

    Molchanov, P., Egiazarian, K., Astola, J., Totsky, A., Leshchenko, S. & Jarabo-Amores, M. P., 2014, In : IEEE Transactions on Aerospace and Electronic Systems. 50, 2, p. 1455-1467 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  44. Published

    Method for creating location-specific audio textures

    Heittola, T., Mesaros, A., Korpi, D., Eronen, A. & Virtanen, T., 2014, In : Eurasip Journal on Audio, Speech, and Music Processing. 1, 9, p. 1-13 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  45. Published

    Effects of spatial smoothing on inter-subject correlation based analysis of FMRI

    Pajula, J. & Tohka, J., 2014, In : Magnetic Resonance Imaging. 32, 9, p. 1114-1124 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  46. Published

    An Approach to Prediction of Signal-Dependent Noise Removal Efficiency by DCT-Based Filter

    Lukin, V., Abramov, S., Rubel, A., Krivenko, S., Naumenko, A., Vozel, B., Chehdi, K., Egiazarian, K. & Astola, J., 2014, In : Telecommunications and Radio Engineering. 73, 18, p. 1645-1659 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  47. Published

    Noise-Robust Texture Description Using Local Contrast Patterns via Global Measures

    Song, T., Li, H., Meng, F., Wu, Q., Luo, B., Zeng, B. & Gabbouj, M., 2014, In : IEEE Signal Processing Letters. 21, 1, p. 93-96 4 p.

    Research output: Contribution to journalArticleScientificpeer-review

  48. Published

    Evaluation and Comparison of Current Fetal Ultrasound Image Segmentation Methods for Biometric Measurements: A Grand Challenge

    Rueda, S., Fathima, S., Knight, C. L., Yaqub, M., Papageorghiou, A. T., Rahmatullah, B., Foi, A., Maggioni, M., Pepe, A., Tohka, J., Stebbing, R. V., McManigle, J. E., Ciurte, A., Bresson, X., Cuadra, M. B., Sun, C., Ponomarev, G. V., Gelfand, M. S., Kazanov, M. D. & Wang, C-W., 2014, In : IEEE Transactions on Medical Imaging. 33, 4, p. 797-813 17 p.

    Research output: Contribution to journalArticleScientificpeer-review

  49. Published

    Semi-Supervised Learning for Ill-Posed Polarimetric SAR Classification

    Uhlmann, S., Kiranyaz, S. & Gabbouj, M., 2014, In : Remote Sensing. 6, 6, p. 4801-4830 30 p.

    Research output: Contribution to journalArticleScientificpeer-review

  50. Published

    CLAP: A web-server for automatic classification of proteins with special reference to multi-domain proteins

    Mutharasu, G., Mehrotra, P., Rakshambikai, R., Martin, J., Srinivasan, N. & Bhaskara, R. M., 2014, In : BMC Bioinformatics. 15, 1, p. 1-6 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  51. Published

    Conditions for Lth-band filters of order 2N as cascades of identical linear-phase FIR spectral factors of order N

    Eghbali, A., Saramäki, T. & Johansson, H., 2014, In : Signal Processing. 97, p. 1-8 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  52. Published

    Instance based personalized multi-form image browsing and retrieval

    Guldogan, E., Olsson, T., Lagerstam, E. & Gabbouj, M., 2014, In : Multimedia Tools and Applications. 71, 4, p. 1087-1104 18 p.

    Research output: Contribution to journalArticleScientificpeer-review

  53. Published

    Wavefront reconstruction in phase-shifting interferometry via sparse coding of amplitude and absolute phase

    Katkovnik, V. & Bioucas-Dias, J., 2014, In : Journal of the Optical Society of America A: Optics Image Science and Vision. 31, 8, p. 1801-1810 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  54. Published

    A novel bispectrum-based frequency encoding technique developed for noisy and multipath fading radio links

    Molchanov, P. A., Astola, J. T., Egiazarian, K. O., Totsky, A. V. & Zelensky, A. A., 2014, In : Telecommunications and Radio Engineering. 73, 3, p. 221-239 19 p.

    Research output: Contribution to journalArticleScientificpeer-review

  55. Published

    A Versatile Software package for inter-subject correlation based analyses of fMRI

    Kauppi, J-P., Pajula, J. & Tohka, J., 2014, In : Frontiers in Neuroinformatics. 8, p. 1-13 13 p., 2.

    Research output: Contribution to journalArticleScientificpeer-review

  56. Published

    Robustness of the division symmetry in Escherichia coli and functional consequences of symmetry breaking

    Gupta, A., Lloyd-Price, J., Oliveira, S. M. D., Yli-Harja, O., Muthukrishnan, A-B. & Ribeiro, A. S., 2014, In : Physical Biology. 11, 6, 066005.

    Research output: Contribution to journalArticleScientificpeer-review

  57. Published

    Indirect Estimation of Signal-Dependent Noise With Nonadaptive Heterogeneous Samples

    Azzari, L. & Foi, A., 2014, In : IEEE Transactions on Image Processing. 23, 8, p. 3459-3467 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  58. Published

    Approaches to Automatic data processing in Hyperspectral remote Sensing

    Lukin, V., Abramov, S., Ponomarenko, N., Krivenko, S., Uss, M., Vozel, B., Chehdi, K., Egiazarian, K. & Astola, J., 2014, In : Telecommunications and Radio Engineering. 73, 13, p. 1125-1139 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  59. Published

    Evaluation of analytical reconstruction with a new gap-filling method in comparison to iterative reconstruction in [11C]-raclopride PET studies

    Tuna, U., Johansson, J. & Ruotsalainen, U., 2014, In : Annals of Nuclear Medicine. 28, 5, p. 417-429 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  60. Published

    Noise Parameter mismatch in variance stabilization, With an Application to Poisson-Gaussian Noise Estimation

    Mäkitalo, M. & Foi, A., 2014, In : IEEE Transactions on Image Processing. 23, 12, p. 5348-5359 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  61. Published

    Predictability and randomness of paw choices are critical elements in the behavioural plasticity of mouse paw preference

    Ribeiro, A. S., Eales, B. A., Lloyd-Price, J. & Biddle, F. G., 2014, In : ANIMAL BEHAVIOUR. p. 167-176 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  62. Published

    Sport Type Classification of Mobile Videos

    Cricri, F., Roininen, M. J., Leppänen, J., Mate, S., Curcio, I. D. D., Uhlmann, S. & Gabbouj, M., 2014, In : IEEE Transactions on Multimedia. p. 917-932 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  63. Published

    Introducing Fault-Tolerance to Multiple-Valued Logic with Error-Correcting Decision Diagrams

    Astola, H., Stankovic, S. & Astola, J., 2014, In : Journal of Multiple-Valued Logic and Soft Computing. 23, 5-6, p. 441-461 20 p.

    Research output: Contribution to journalArticleScientificpeer-review

  64. Published

    Experimental study of the robustness of bispectral-based modulation

    Astola, J. T., Kurudymov, D. I., Solodovnik, V. F. & Totsky, A. V., 2014, In : Telecommunications and Radio Engineering. 73, 5, p. 457-465 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  65. Published

    Innate Immune Activity Is Detected Prior to Seroconversion in Children With HLA-Conferred Type 1 Diabetes Susceptibility

    Kallionpää, H., Elo, L. L., Laajala, E., Mykkänen, J., Ricano-Ponce, I., Vaarma, M., Laajala, T. D., Hyöty, H., Ilonen, J., Veijola, R., Simell, T., Wijmenga, C., Knip, M., Lähdesmäki, H., Simell, O. & Lahesmaa, R., 2014, In : Diabetes. 63, 7, p. 2402-2414 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  66. Published

    Quantitative analysis of colony morphology in yeast

    Ruusuvuori, P., Lin, J., Scott, A., Tan, Z., Sorsa, S., Kallio, A., Nykter, M., Yli-Harja, O., Shmulevich, I. & Dudley, A., 2014, In : BioTechniques. 56, 1, p. 18-27 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  67. Published

    POMO - Plotting Omics analysis results for Multiple Organisms

    Lin, J., Kreisberg, R., Kallio, A., Dudley, A. M., Nykter, M., Shmulevich, I., May, P. & Autio, R., 2014, In : BMC Genomics. 14, p. 1-10 10 p., 918.

    Research output: Contribution to journalArticleScientificpeer-review

  68. Published

    Estimation of fluorescence-tagged RNA numbers from spot intensities

    Häkkinen, A., Kandhavelu, M., Garasto, S. & Ribeiro, A. S., 2014, In : Bioinformatics. 30, 8, p. 1146-1153 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  69. Published

    Quantifying the importance of cyclopean view and binocular rivalry-related features for objective quality assessment of mobile 3D video

    Jin, L., Boev, A., Egiazarian, K. & Gotchev, A., 2014, In : Eurasip Journal on Image and Video Processing. January, p. 1-7 7 p., 6.

    Research output: Contribution to journalArticleScientificpeer-review

  70. Published

    Difference of gaussians revolved along elliptical paths for ultrasound fetal head segmentation

    Foi, A., Maggioni, M., Pepe, A., Rueda, S., Noble, A. J., Papageorghiou, A. T. & Tohka, J., 2014, In : Computerized Medical Imaging and Graphics. 38, 8, p. 774-784 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  71. Published

    Quantification of Dynamic Morphological Drug Responses in 3D Organotypic Cell Cultures by Automated Image Analysis

    Härmä, V., Schkov, H-P., Happonen, A., Ahonen, I., Virtanen, J., Siitari, H., Åkerfelt, M., Lötjönen, J. & Nees, M., 2014, In : PLoS ONE. May, 8, p. 1-11 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  72. Published

    DOT1L -HES6 fusion drives androgen independent growth in prostate cancer

    Annala, M., Kivinummi, K., Leinonen, K., Tuominen, J., Zhang, W., Visakorpi, T. & Nykter, M., 2014, In : EMBO Molecular Medicine. 6, p. 1121-1123 4 p.

    Research output: Contribution to journalArticleScientificpeer-review

  73. Published

    In Vivo Kinetics of Segregation and Polar Retention of MS2-GFP-RNA Complexes in Escherichia coli

    Gupta, A., Lloyd-Price, J., Neeli-Venkata, R., Oliveira, S. M. D. & Ribeiro, A. S., 2014, In : Biophysical Journal. 106, 9, p. 1928-1937 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  74. Published

    Differential Coding Using Enhanced Inter-Layer Reference Picture for the Scalable Extension of H.265/HEVC Video Codec

    Aminlou, A., Lainema, J., Ugur, K., Hannuksela, M. M. & Gabbouj, M., 2014, In : IEEE Transactions on Circuits and Systems for Video Technology. 24, 11, p. 1945-1956 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  75. Published

    Serum metabolic profiles in overweight and obese women with and without metabolic syndrome

    Wiklund, P. K., Pekkala, S., Autio, R., Munukka, E., Xu, L., Saltevo, J., Cheng, S., Kujala, U. M., Alen, M. & Cheng, S., 2014, In : Diabetology and Metabolic Syndrome. 6, 9 p., 40.

    Research output: Contribution to journalArticleScientificpeer-review

  76. Published

    Correlation based universal image/video coding loss recovery

    Wu, J., Lin, W., Shi, G. & Xiao, J., 2014, In : Journal of Visual Communication and Image Representation. 25, 7, p. 1507-1515 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  77. Published

    An automatic framework for quantitative validation of voxel based morphometry measures of anatomical brain asymmetry

    Pepe, A., Dinov, I. & Tohka, J., 2014, In : NeuroImage. 56 p.

    Research output: Contribution to journalArticleScientificpeer-review

  78. Published

    KNN classification of metallic targets using the magnetic polarisability tensor

    Makkonen, J., Marsh, L. A., Vihonen, J., Järvi, A., Armitage, D. W., Visa, A. & Peyton, A. J., 2014, In : Measurement Science and Technology. 25, 5, p. 1-9 9 p., 055105.

    Research output: Contribution to journalArticleScientificpeer-review

  79. Published

    Quantum Biology on the Edge of Quantum Chaos

    Vattay, G., Kauffman, S. & Niiranen, S., 2014, In : PLoS ONE. 9, 3, p. 1-6 6 p., e89107.

    Research output: Contribution to journalArticleScientificpeer-review

  80. Published

    Exemplar-Based Sparse representation with Residual Compensation for Voice Conversion

    Wu, Z., Virtanen, T., Chng, E. S. & Li, H., 2014, In : IEEE Transactions on Audio Speech and Language Processing. 22, 10, p. 1506-1521 15 p.

    Research output: Contribution to journalArticleScientificpeer-review

  81. Published

    Screen for mitochondrial DNA copy number maintenance genes reveals essential role for ATP synthase

    Fukuoh, A., Cannino, G., Gerards, M., Buckley, S., Kazancioglu, S., Scialo, F., Lihavainen, E., Ribeiro, A., Dufour, E. & Jacobs, H. T., 2014, In : Molecular Systems Biology. 10, 734, p. 1-21 21 p.

    Research output: Contribution to journalArticleScientificpeer-review

  82. Published

    Denoising of two-photon fluorescence images with Block-Matching 3D filtering

    Danielyan, A., Wu, Y-W., Shih, P-S., Dembitskaya, Y. & Semyanov, A., 2014, In : Methods. 68, 2, p. 308-316 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  83. Published

    Classification of small UAVs and birds by micro-Doppler signatures

    Molchanov, P., Harmanny, R. I., de Wit, J. J., Egiazarian, K. & Astola, J., 2014, In : International Journal of Microwave and Wireless Technologies. 6, 3-4, p. 435-444

    Research output: Contribution to journalArticleScientificpeer-review

  84. Published

    Factors Related to Sustained Use of a Free Mobile App for Dietary Self-Monitoring With Photography and Peer Feedback: Retrospective Cohort Study

    Helander, E., Kaipainen, K., Korhonen, I. & Wansink, B., 2014, In : Journal of Medical Internet Research. 16, 4, p. 1-13 13 p., e109.

    Research output: Contribution to journalArticleScientificpeer-review

  85. Published

    Performance evaluation of IEEE 802.11p-enabled vehicular video surveillance system

    Bellalta, B., Belyaev, E., Jonsson, M. & Vinel, A., 2014, In : IEEE Communications Letters. 18, 4, p. 708-711 4 p.

    Research output: Contribution to journalArticleScientificpeer-review

  86. Published

    Representation of Multiple-Valued Functions with Flat Vilenkin-Chrestenson Spectra by Decision Diagrams

    Stankovic, S., Stankovic, M. & Astola, J., 2014, In : Journal of Multiple-Valued Logic and Soft Computing. 23, 5-6, p. 485-501 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  87. Published

    Protein-protein interaction and coarse grained simulation study of Glioblastoma Multiforme reveals novel pathways of GPR17

    Mutharasu, G., Yli-harja, O. & Kandhavelu, M., 2014, In : TASK Quarterly. 18, 4, p. 321-325 5 p.

    Research output: Contribution to journalArticleScientificpeer-review

  88. Published

    Prospecting hydrogen production of Escherichia coli by metabolic network modeling

    Seppälä, J. J., Larjo, A., Aho, T., Yli-Harja, O., Karp, M. T. & Santala, V., 10 Sep 2013, In : International Journal of Hydrogen Energy. 38, 27, p. 11780-11789 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  89. Published

    Bioprocess data mining using regularized regression and random forests

    Hassan, S. S., Farhan, M., Mangayil, R., Huttunen, H. & Aho, T., 12 Aug 2013, In : BMC Systems Biology. 7, Suppl 1, 7 p., 5.

    Research output: Contribution to journalArticleScientificpeer-review

  90. Published

    Structure-Dynamics Relationships in Bursting Neuronal Networks Revealed Using a Prediction Framework

    Mäki-Marttunen, T., Acimovic, J., Linne, M-L. & Ruohonen, K., 2013, In : PLoS ONE. 8, 7, p. 1-16 16 p., e69373.

    Research output: Contribution to journalArticleScientificpeer-review

  91. Published

    Comparison of Models for IP3 Receptor Kinetics Using Stochastic Simulations

    Hituri, K. & Linne, M-L., 2013, In : PLoS ONE. 8, 4, p. 1-13 13 p., e59618.

    Research output: Contribution to journalArticleScientificpeer-review

  92. Published

    Multiview-Video-Plus-Depth Coding Based on the Advanced Video Coding Standard

    Hannuksela, M. M., Rusanovskyy, D., Su, W., Chen, L., Li, R., Aflaki, P., Lan, D., Joachimiak, M., Li, H. & Gabbouj, M., 2013, In : IEEE Transactions on Image Processing. 22, 9, p. 3449-3458 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  93. Published

    Gene-pair expression signatures reveal lineage control

    Heinäniemi, M., Nykter, M., Kramer, R., Wienecke-Baldacchino, A., Sinkkonen, L., Zhou, J. X., Kreisberg, R., Kauffman, S. A., Huang, S. & Shmulevich, I., 2013, In : Nature Methods. 10, 6, p. 577-583 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  94. Published

    Transcriptome and small RNA deep sequencing reveals deregulation of miRNA biogenesis in human glioma

    Moore, M. L., Kivinen, V., Liu, Y., Annala, M., Cogdell, D., Liu, X., Liu, C-G., Sawaya, R., Yli-Harja, O., Shmulevich, I., Fuller, G. N., Zhang, W. & Nykter, M., 2013, In : Journal of Pathology. 229, 3, p. 449-459 11 p., 4109.

    Research output: Contribution to journalArticleScientificpeer-review

  95. Published

    Classification of ground moving targets using bicepstrum-based features extracted from Micro-Doppler radar signatures

    Molchanov, P. O., Astola, J. T., Egiazarian, K. O. & Totsky, A. V., 2013, In : Eurasip Journal on Advances in Signal Processing. 1, p. 1-13 13 p., 61.

    Research output: Contribution to journalArticleScientificpeer-review

  96. Published

    Evaluation of methods for modeling transcription-factor sequence specificity

    Weirauch, M., Cote, A., Norel, R., Annala, M., Zhao, Y., Riley, T., Saez-Rodriguez, J., Cokelaer, T., Vedenko, A., Talukder, S., Bussemaker, H., Morris, Q., Bulyk, M., Stolovitzky, G., Hughes, T. & Nykter, M. DREAM. C., 2013, In : Nature Biotechnology. 31, 2, p. 126-134 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  97. Published

    Mind reading with regularized multinomial logistic regression

    Huttunen, H., Manninen, T., Kauppi, J-P. & Tohka, J., 2013, In : Machine Vision and Applications. 24, 6, p. 1311-1325

    Research output: Contribution to journalArticleScientificpeer-review

  98. Published

    Sorad: A systems biology approach to predict and modulate dynamic signaling pathway response from phosphoproteome time-course measurements

    Äijö, T., Granberg, K. & Lähdesmäki, H., 2013, In : Bioinformatics. 29, 10, p. 1283-1291 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  99. Published

    Genome Sequence of Halanaerobium saccharolyticum subsp. saccharolyticum Strain DSM 6643T, a Halophilic Hydrogen-Producing Bacterium

    Kivistö, A., Larjo, A., Ciranna, A., Santala, V., Roos, C. & Karp, M., 2013, In : Genome Announcements. 1, 2, p. 1-2 2 p.

    Research output: Contribution to journalArticleScientificpeer-review

  100. Published

    Characterization of aberrant pathways across human cancers

    Ylipää, A., Yli-Harja, O., Zhang, W. & Nykter, M., 2013, In : BMC Systems Biology. 7, Supplement 1, p. 1-12 12 p., S1.

    Research output: Contribution to journalArticleScientificpeer-review

  101. Published

    Feasibility of a Personal Health Technology-Based Psychological Intervention for Men with Stress and Mood Problems: Randomized Controlled Pilot Trial

    Lappalainen, P., Kaipainen, K., Lappalainen, R., Hoffren, H., Myllymäki, T., Kinnunen, M-L., Mattila, E., Happonen, A. P., Rusko, H. & Korhonen, I., 2013, In : JMIR Research Protocols. 2, 1, p. 1-17 17 p., e1.

    Research output: Contribution to journalArticleScientificpeer-review

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