Tampere University of Technology

TUTCRIS Research Portal

Research group: Biological Physics and Soft Matter

Research unit: Research Group

  1. 2017
  2. Published

    Long-chain GM1 gangliosides alter transmembrane domain registration through interdigitation

    Manna, M., Javanainen, M., Martinez-Seara Monne, H., Gabius, H-J., Rog, T. & Vattulainen, I., 1 May 2017, In : Biochimica et Biophysica Acta: Biomembranes. 1859, 5, p. 870-878 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  3. Published

    Glycosylation and Lipids Working in Concert Direct CD2 Ectodomain Orientation and Presentation

    Polley, A., Orłowski, A., Danne, R., Gurtovenko, A. A., Bernardino de La Serna, J., Eggeling, C., Davis, S. J., Róg, T. & Vattulainen, I., 2 Mar 2017, In : Journal of Physical Chemistry Letters. 8, 5, p. 1060-1066 7 p.

    Research output: Contribution to journalLetterScientificpeer-review

  4. Published

    On Atomistic Models for Molecular Oxygen

    Javanainen, M., Vattulainen, I. & Monticelli, L., 2017, In : Journal of Physical Chemistry Part B. 121, 3, p. 518–528 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  5. 2016
  6. Published

    Mechanism of allosteric regulation of β2-adrenergic receptor by cholesterol

    Manna, M., Niemelä, M., Tynkkynen, J., Javanainen, M., Kulig, W., Müller, D. J., Rog, T. & Vattulainen, I., 29 Nov 2016, In : eLIFE. 5, e18432.

    Research output: Contribution to journalArticleScientificpeer-review

  7. Published

    Molecular electrometer and binding of cations to phospholipid bilayers

    Catte, A., Girych, M., Javanainen, M., Loison, C., Melcr, J., Miettinen, M. S., Monticelli, L., Määttä, J., Oganesyan, V. S., Ollila, O. H. S., Tynkkynen, J. & Vilov, S., Nov 2016, In : Physical Chemistry Chemical Physics. 18, 47, p. 32560-32569

    Research output: Contribution to journalArticleScientificpeer-review

  8. Published

    Data including GROMACS input files for atomistic molecular dynamics simulations of mixed, asymmetric bilayers including molecular topologies, equilibrated structures, and force field for lipids compatible with OPLS-AA parameters

    Róg, T., Orłowski, A., Llorente, A., Skotland, T., Sylvänne, T., Kauhanen, D., Ekroos, K., Sandvig, K. & Vattulainen, I., 1 Jun 2016, In : Data in Brief. 7, p. 1171-1174 4 p.

    Research output: Contribution to journalArticleScientificpeer-review

  9. Published

    Oxidation of Cholesterol Changes the Physical Properties of Lipid Membranes

    Kulig, W., Olzynska, A., Jurkiewicz, P., Kantola, A. M., Manna, M., Pourmousa, M., Vazdar, M., Cwiklik, L., Rog, T., Khelashvili, G., Harries, D., Telkki, V-V., Hof, M., Vattulainen, I. & Jungwirth, P., 16 Feb 2016, In : Biophysical Journal. 110, 3, Supplement 1, p. 84a 1 p.

    Research output: Contribution to journalArticleScientific

  10. Published

    Protocol to Avoid Possible Artifacts in Atomistic Simulation of GPCR Proteins whose Crystal Structure is Heavily Engineered

    Manna, M., Kulig, W., Javanainen, M., Tynkkynen, J., Hensen, U., Müller, D. J., Rog, T. & Vattulainen, I., 16 Feb 2016, In : Biophysical Journal. 110, 3, Supplement 1, p. 59a 1 p.

    Research output: Contribution to journalArticleScientific

  11. Published

    Selective effect of cell membrane on synaptic neurotransmission

    Postila, P. A., Vattulainen, I. & Róg, T., 19 Jan 2016, In : Scientific Reports. 6, 19345.

    Research output: Contribution to journalArticleScientificpeer-review

  12. Published

    Cholesterol oxidation products and their biological importance

    Kulig, W., Cwiklik, L., Jurkiewicz, P., Rog, T. & Vattulainen, I., 2016, In : Chemistry and Physics of Lipids. 199, p. 144-160 17 p.

    Research output: Contribution to journalArticleScientificpeer-review

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