Tampere University of Technology

TUTCRIS Research Portal

Tomasz Rog

  1. 2018
  2. Published

    Glucosylceramide modifies the LPS-induced inflammatory response in macrophages and the orientation of the LPS/TLR4 complex in silico

    Mobarak, E., Håversen, L., Manna, M., Rutberg, M., Levin, M., Perkins, R., Rog, T., Vattulainen, I. & Borén, J., 1 Dec 2018, In : Scientific Reports. 8, 1, 13600.

    Research output: Contribution to journalArticleScientificpeer-review

  3. Published

    The effect of light sensitizer localization on the stability of indocyanine green liposomes

    Lajunen, T., Nurmi, R., Wilbie, D., Ruoslahti, T., Johansson, N. G., Korhonen, O., Rog, T., Bunker, A., Ruponen, M. & Urtti, A., 28 Aug 2018, In : Journal of Controlled Release. 284, p. 213-223 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  4. Published

    Negatively Charged Gangliosides Promote Membrane Association of Amphipathic Neurotransmitters

    Juhola, H., Postila, P. A., Rissanen, S., Lolicato, F., Vattulainen, I. & Róg, T., 1 Aug 2018, In : Neuroscience. 384, p. 214-223 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  5. Published

    Membrane bound COMT isoform is an interfacial enzyme: General mechanism and new drug design paradigm

    Magarkar, A., Parkkila, P., Viitala, T., Lajunen, T., Mobarak, E., Licari, G., Cramariuc, O., Vauthey, E., Róg, T. & Bunker, A., 11 Apr 2018, In : Chemical Communications. 54, 28, p. 3440-3443 4 p.

    Research output: Contribution to journalArticleScientificpeer-review

  6. E-pub ahead of print

    Cholesterol Protects the Oxidized Lipid Bilayer from Water Injury: An All-Atom Molecular Dynamics Study

    Owen, M. C., Kulig, W., Rog, T., Vattulainen, I. & Strodel, B., 17 Mar 2018, In : Journal of Membrane Biology. p. 1-14 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  7. Published

    Bobbing of Oxysterols: Molecular Mechanism for Translocation of Tail-Oxidized Sterols through Biological Membranes

    Kulig, W., Mikkolainen, H., Olżyńska, A., Jurkiewicz, P., Cwiklik, L., Hof, M., Vattulainen, I., Jungwirth, P. & Rog, T., 1 Mar 2018, In : Journal of Physical Chemistry Letters. 9, 5, p. 1118-1123 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  8. E-pub ahead of print

    Physiologically-relevant levels of sphingomyelin, but not GM1, induces a β-sheet-rich structure in the amyloid-β(1-42) monomer

    Owen, M. C., Kulig, W., Poojari, C., Rog, T. & Strodel, B., 1 Jan 2018, In : Biochimica et Biophysica Acta - Biomembranes.

    Research output: Contribution to journalArticleScientificpeer-review

  9. E-pub ahead of print

    How Cardiolipin Peroxidation Alters the Properties of the Inner Mitochondrial Membrane?

    Vähäheikkilä, M., Peltomaa, T., Rog, T., Vazdar, M., Pöyry, S. & Vattulainen, I., 2018, In : Chemistry and Physics of Lipids. 214, 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  10. E-pub ahead of print

    How to minimize dye-induced perturbations while studying biomembrane structure and dynamics: PEG linkers as a rational alternative

    Mobarak, E., Javanainen, M., Kulig, W., Honigmann, A., Sezgin, E., Aho, N., Eggeling, C., Rog, T. & Vattulainen, I., 2018, In : Biochimica et Biophysica Acta - Biomembranes.

    Research output: Contribution to journalArticleScientificpeer-review

  11. 2017
  12. Published

    DoGlycans-Tools for Preparing Carbohydrate Structures for Atomistic Simulations of Glycoproteins, Glycolipids, and Carbohydrate Polymers for GROMACS

    Danne, R., Poojari, C., Martinez-Seara, H., Rissanen, S., Lolicato, F., Róg, T. & Vattulainen, I., 23 Oct 2017, In : Journal of Chemical Information and Modeling. 57, 10, p. 2401-2406 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

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