Tampere University of Technology

TUTCRIS Research Portal

Tomasz Rog

  1. Published

    How Anacetrapib Inhibits the Activity of the Cholesteryl Ester Transfer Protein? Perspective through Atomistic Simulations

    Äijänen, T., Koivuniemi, A., Javanainen, M., Rissanen, S., Rog, T. & Vattulainen, I., 2014, In : PLoS Computational Biology. 10, 11, p. 1-14 14 p., e1003987.

    Research output: Contribution to journalArticleScientificpeer-review

  2. Published

    Tilt: major factor in sterols' ordering capability in membranes

    Aittoniemi, J., Rog, T., Niemelä, P., Pasenkiewicz-Gierula, M., Karttunen, M. & Vattulainen, I., 2006, In : Journal of Physical Chemistry Part B. 110, 51, p. 25562-25564

    Research output: Contribution to journalArticleScientificpeer-review

  3. Published

    Calcium Directly Regulates Phosphatidylinositol 4,5-Bisphosphate Headgroup Conformation and Recognition

    Bilkova, E., Pleskot, R., Rissanen, S., Sun, S., Czogalla, A., Cwiklik, L., Róg, T., Vattulainen, I., Cremer, P. S., Jungwirth, P. & Coskun, Ü., 22 Mar 2017, In : Journal of the American Chemical Society. 139, 11, p. 4019-4024 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  4. Published

    Effect of sphingomyelin headgroup size on molecular properties and interactions with cholesterol

    Bjorkbom, A., Rog, T., Kaszuba, K., Kurita, M., Yamaguchi, S., Lonnfors, M., Nyholm, T., Vattulainen, I., Katsumura, S. & Slotte, J. P., 2010, In : Biophysical Journal. 99, 10, p. 3300-3308

    Research output: Contribution to journalArticleScientificpeer-review

  5. Published

    N- and O-methylation of sphingomyelin markedly affects its membrane properties and interactions with cholesterol

    Björkholm, A., Rog, T., Kankaanpää, P., Lindroos, D., Kaszuba, K., Kurita, M., Yamaguchi, S., Yamamoto, T., Jaikishan, S., Paavolainen, L., Päivärinne, J., Nyholm, T., Katsumura, S., Vattulainen, I. & Slotte, P. J., 2011, In : Biochimica et Biophysica Acta: Biomembranes. 1808, 4, p. 1179-1186

    Research output: Contribution to journalArticleScientificpeer-review

  6. Published

    Toward Atomistic Resolution Structure of Phosphatidylcholine Headgroup and Glycerol Backbone at Different Ambient Conditions

    Botan, A., Favela-Rosales, F., Fuchs, P. F. J., Javanainen, M., Kanduč, M., Kulig, W., Lamberg, A., Loison, C., Lyubartsev, A., Miettinen, M. S., Monticelli, L., Määttä, J., Ollila, O. H. S., Retegan, M., Róg, T., Santuz, H. & Tynkkynen, J., 2015, In : Journal of Physical Chemistry Part B. 119, 49, p. 15075-15088 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  7. Molecular dynamics simulations of the enzyme Catechol-O-Methyltransferase: methodological issues

    Bunker, A., Männistö, P. T., St. Pierre, J-F., Rog, T., Pomorski, P., Stimson, L. & Karttunen, M., 2008, In : SAR and QSAR in Environmental Research. 19, 1&2, p. 179-189

    Research output: Contribution to journalArticleScientificpeer-review

  8. Published

    A computational QM/MM insight on the iron-sulphur cluster in cytocrhome BC1

    Cramariuc, O., Iglesias-Fernandez, J., Kaszuba, K., Rog, T., Rovira, C. & Vattulainen, I., 2013, Physics Days 2013 - Fysiikan päivät 2013, the 47th annual meeting of the Finnish Physical Society, Otaniemi, Espoo, March 14-16, 2013. 1 p. (Physics Days / Fysiikan päivät : Annual Meeting of the Finnish Physical Society).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientific

  9. Published

    Mechanism for translocation of fluoroquinolones across lipid membranes

    Cramariuc, O., Rog, T., Javanainen, M., Monticelli, L., Polishchuk, A. & Vattulainen, I., 2012, In : Biochimica et Biophysica Acta: Biomembranes. 1818, 11, p. 2563-2571

    Research output: Contribution to journalArticleScientificpeer-review

  10. Published

    Drug-lipid membrane interaction mechanisms revealed through molecular simulations

    Cramariuc, O., Rog, T. & Vattulainen, I., 2012, In : Current Physical Chemistry. 2, 4, p. 379-400

    Research output: Contribution to journalReview ArticleScientificpeer-review

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