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Construction of a computational data analysis pipeline using a workflow system

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review


Original languageEnglish
Title of host publicationProceedings of the Seventh International Workshop on Computational Systems Biology, WCSB 2010, Luxembourg, June 16-18, 2010. TICSP Series
EditorsMatti Nykter, Pekka Ruusuvuori, Carsten Carlberg, Olli Yli-Harja
Pages4 p
Publication statusPublished - 2010
Publication typeA4 Article in a conference publication


We present how we used a workflow system to create a computational pipeline for storing, preprocessing and statistically analyzing gene expression microarray data together with public annotation information. The pipeline demonstrates that the used workflow system can facilitate reuse and documentation of the analysis methods which are adaptable to changing integrative data analysis approaches.

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Field of science, Statistics Finland

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