Chromatin organization regulates viral egress dynamics

Aho, V., Myllys, M., Ruokolainen, V., Hakanen, S., Mäntylä, E., Virtanen, J., Hukkanen, V., Kühn, T., Timonen, J., Mattila, K., Larabell, C. A. & Vihinen-Ranta, M., 1 Dec 2017, In : Scientific Reports. 7, 1, 3692.

Research output: Contribution to journal › Article › Scientific › peer-review

Automatic Posture and Movement Tracking of Infants with Wearable Movement Sensors

Airaksinen, M., Räsänen, O., Ilén, E., Häyrinen, T., Kivi, A., Marchi, V., Gallen, A., Blom, S., Varhe, A., Kaartinen, N., Haataja, L. & Vanhatalo, S., 13 Jan 2020, In : Scientific Reports. 10, 1, 13 p., 169.

Research output: Contribution to journal › Article › Scientific › peer-review

Facile strain analysis of largely bending films by a surface-labelled grating method

Akamatsu, N., Tashiro, W., Saito, K., Mamiya, J. I., Kinoshita, M., Ikeda, T., Takeya, J., Fujikawa, S., Priimagi, A. & Shishido, A., 20 Jun 2014, In : Scientific Reports. 4, 5377.

Research output: Contribution to journal › Article › Scientific › peer-review

Speeding up crystallization

Akola, J. & Jones, R. O., 15 Dec 2017, In : Science. 358, 6369, p. 1386 1 p.

Research output: Contribution to journal › Review Article › Scientific › peer-review

DroneRF dataset: A dataset of drones for RF-based detection, classification and identification

Allahham, MHD. S., Al-Sa'd, M. F., Al-Ali, A., Mohamed, A., Khattab, T. & Erbad, A., 1 Oct 2019, In : Data in Brief. 26, 104313.

Research output: Contribution to journal › Article › Scientific › peer-review

On the linear programming bound for linear Lee codes

Astola, H. & Tabus, I., 1 Mar 2016, In : SpringerPlus. 5, 1, p. 1-13 13 p., 246.

Research output: Contribution to journal › Article › Scientific › peer-review

Aerosol gas exchange system (AGES) for nanoparticle sampling at elevated temperatures: Modeling and experimental characterization

Bainschab, M., Martikainen, S., Keskinen, J., Bergmann, A. & Karjalainen, P., 20 Nov 2019, In : Scientific Reports. 9, 1, 12 p., 17149.

Research output: Contribution to journal › Article › Scientific › peer-review

Multilayer Aggregation with Statistical Validation: Application to Investor Networks

Baltakys, K., Kanniainen, J. & Emmert-Streib, F., 1 Dec 2018, In : Scientific Reports. 8, 1, 8198.

Research output: Contribution to journal › Article › Scientific › peer-review

Real sequence effects on the search dynamics of transcription factors on DNA

Bauer, M., Rasmussen, E. S., Lomholt, M. A. & Metzler, R., 8 Jul 2015, In : Scientific Reports. 5, 10072.

Research output: Contribution to journal › Article › Scientific › peer-review

Automatic classification of IgA endomysial antibody test for celiac disease: a new method deploying machine learning

Caetano dos Santos, F. L., Michalek, I. M., Laurila, K., Kaukinen, K., Hyttinen, J. & Lindfors, K., 1 Dec 2019, In : Scientific Reports. 9, 1, 9217.

Research output: Contribution to journal › Article › Scientific › peer-review

Step down Vascular Calcification Analysis using State-of-the-Art Nanoanalysis Techniques

Curtze, S. C., Kratz, M., Steinert, M. & Vogt, S., 16 Mar 2016, In : Scientific Reports. 6, 23285.

Research output: Contribution to journal › Article › Scientific › peer-review

Mechanically driven strategies to improve electromechanical behaviour of printed stretchable electronic systems

Di Vito, D., Mosallaei, M., Khorramdel, B., Kanerva, M. & Mäntysalo, M., 2020, In : Scientific Reports. 10, 1, 11 p., 12037.

Research output: Contribution to journal › Article › Scientific › peer-review

Surface-Enhanced Impulsive Coherent Vibrational Spectroscopy

Du, J., Harra, J., Virkki, M., Mäkelä, J. M., Leng, Y., Kauranen, M. & Kobayashi, T., 4 Nov 2016, In : Scientific Reports. 6, 36471.

Research output: Contribution to journal › Article › Scientific › peer-review

A Bayesian analysis of the chromosome architecture of human disorders by integrating reductionist data

Emmert-Streib, F., De Matos Simoes, R., Tripathi, S., Glazko, G. V. & Dehmer, M., 2012, In : Scientific Reports. 2, 513.

Research output: Contribution to journal › Article › Scientific › peer-review

Effects of Sintering Temperature on Crystallization and Fabrication of Porous Bioactive Glass Scaffolds for Bone Regeneration

Erasmus, E. P., Johnson, O. T., Sigalas, I. & Massera, J., 1 Dec 2017, In : Scientific Reports. 7, 1, 6046.

Research output: Contribution to journal › Article › Scientific › peer-review

In vitro Evaluation of Porous borosilicate, borophosphate and phosphate Bioactive Glasses Scaffolds fabricated using Foaming Agent for Bone Regeneration

Erasmus, E. P., Sule, R., Johnson, O. T., Massera, J. & Sigalas, I., 1 Dec 2018, In : Scientific Reports. 8, 1, 3699.

Research output: Contribution to journal › Article › Scientific › peer-review

Subangstrom resolution x-ray structure details aquaporin-water interactions

Eriksson, U. K., Fischer, G., Friemann, R., Enkavi, G., Tajkhorshid, E. & Neutze, R., 2013, In : Science. 340, 6138, p. 1346-1349 4 p.

Research output: Contribution to journal › Article › Scientific › peer-review

Upstream Transcription Factor 1 (USF1) allelic variants regulate lipoprotein metabolism in women and USF1 expression in atherosclerotic plaque

Fan, Y. M., Hernesniemi, J., Oksala, N., Levula, M., Raitoharju, E., Collings, A., Hutri-Kähönen, N., Juonala, M., Marniemi, J., Lyytikäinen, L. P., Seppälä, I., Mennander, A., Tarkka, M., Kangas, A. J., Soininen, P., Salenius, J. P., Klopp, N., Illig, T., Laitinen, T., Ala-Korpela, M., Laaksonen, R., Viikari, J., Kähönen, M., Raitakari, O. T. & Lehtimäki, T., 11 Apr 2014, In : Scientific Reports. 4, 4650.

Research output: Contribution to journal › Article › Scientific › peer-review

Sensitivity enhancement of flexible gas sensors via conversion of inkjet-printed silver electrodes into porous gold counterparts

Fang, Y., Akbari, M., Sydänheimo, L., Ukkonen, L. & Tentzeris, M. M., 1 Dec 2017, In : Scientific Reports. 7, 1, 8988.

Research output: Contribution to journal › Article › Scientific › peer-review

Azobenzene-based sinusoidal surface topography drives focal adhesion confinement and guides collective migration of epithelial cells

Fedele, C., Mäntylä, E., Belardi, B., Hamkins-Indik, T., Cavalli, S., Netti, P. A., Fletcher, D. A., Nymark, S., Priimagi, A. & Ihalainen, T. O., 2020, In : Scientific Reports. 10, 1, 15 p., 15329.

Research output: Contribution to journal › Article › Scientific › peer-review

Highly ductile amorphous oxide at room temperature and high strain rate

Frankberg, E. J., Kalikka, J., Ferré, F. G., Joly-Pottuz, L., Salminen, T., Hintikka, J., Hokka, M., Koneti, S., Douillard, T., Le Saint, B., Kreiml, P., Cordill, M. J., Epicier, T., Stauffer, D., Vanazzi, M., Roiban, L., Akola, J., Fonzo, F. D., Levänen, E. & Masenelli-Varlot, K., 15 Nov 2019, In : Science. 366, 6467, p. 864-869 6 p.

Research output: Contribution to journal › Article › Scientific › peer-review

First passage time distribution in heterogeneity controlled kinetics: Going beyond the mean first passage time

Godec, A. & Metzler, R., 8 Feb 2016, In : Scientific Reports. 6, 20349.

Research output: Contribution to journal › Article › Scientific › peer-review

Membrane omega-3 fatty acids modulate the oligomerisation kinetics of adenosine A_2A and dopamine D₂ receptors

Guixà-González, R., Javanainen, M., Gómez-Soler, M., Cordobilla, B., Domingo, J. C., Sanz, F., Pastor, M., Ciruela, F., Martinez-Seara, H. & Selent, J., 22 Jan 2016, In : Scientific Reports. 6, 19839.

Research output: Contribution to journal › Article › Scientific › peer-review

The evolutionary history of lethal metastatic prostate cancer

Gundem, G., Van Loo, P., Kremeyer, B., Alexandrov, L. B., Tubio, J. M. C., Papaemmanuil, E., Brewer, D. S., Kallio, H. M. L., Högnäs, G., Annala, M., Kivinummi, K., Goody, V., Latimer, C., O'Meara, S., Dawson, K. J., Isaacs, W., Emmert-Buck, M. R., Nykter, M., Foster, C., Kote-Jarai, Z., Easton, D., Whitaker, H. C., Neal, D. E., Cooper, C. S., Eeles, R. A., Visakorpi, T., Campbell, P. J., McDermott, U., Wedge, D. C. & Bova, G. S., 15 Apr 2015, In : Nature. 520, 7547, p. 353-357 5 p.

Research output: Contribution to journal › Article › Scientific › peer-review

Structure-phenotype correlations of human CYP21A2 mutations in congenital adrenal hyperplasia

Haider, S., Islam, B., D'Atri, V., Sgobba, M., Poojari, C., Sun, L., Yuen, T., Zaidi, M. & New, M. I., 12 Feb 2013, In : Proceedings of the National Academy of Sciences of the United States of America. 110, 7, p. 2605-2610 6 p.

Research output: Contribution to journal › Article › Scientific › peer-review

Genome-wide modeling of transcription kinetics reveals patterns of RNA production delays

Honkela, A., Peltonen, J., Topa, H., Charapitsa, I., Matarese, F., Grote, K., Stunnenberg, H. G., Reid, G., Lawrence, N. D. & Rattray, M., 20 Oct 2015, In : Proceedings of the National Academy of Sciences of the United States of America. 112, 42, p. 13115-13120 6 p.

Research output: Contribution to journal › Article › Scientific › peer-review

Genetic similarity of biological samples to counter bio-hacking of DNA-sequencing functionality

Islam, M. S., Ivanov, S., Robson, E., Dooley-Cullinane, T., Coffey, L., Doolin, K. & Balasubramaniam, S., 1 Dec 2019, In : Scientific Reports. 9, 1, 8684.

Research output: Contribution to journal › Article › Scientific › peer-review

Brain hemodynamic activity during viewing and re-viewing of comedy movies explained by experienced humor

Jääskeläinen, I. P., Pajula, J., Tohka, J., Lee, H. J., Kuo, W. J. & Lin, F. H., 21 Jun 2016, In : Scientific Reports. 6, 27741.

Research output: Contribution to journal › Article › Scientific › peer-review

Physical chemistry: Water's wafer-thin surface

Jungwirth, P., 8 Jun 2011, In : Nature. 474, 7350, p. 168-169 2 p.

Research output: Contribution to journal › Short survey › Scientific › peer-review

Parkinson's disease detection from 20-step walking tests using inertial sensors of a smartphone: Machine learning approach based on an observational case-control study

Juutinen, M., Wang, C., Zhu, J., Haladjian, J., Ruokolainen, J., Puustinen, J. & Vehkaoja, A., 2020, In : PLoS ONE. 15, 7, 19 p., e0236258.

Research output: Contribution to journal › Article › Scientific › peer-review

Entropy analysis of word-length series of natural language texts: Effects of text language and genre

Kalimeri, M., Constantoudis, V., Papadimitriou, C., Karamanos, K., Diakonos, F. K. & Papageorgiou, H., Sep 2012, In : INTERNATIONAL JOURNAL OF BIFURCATION AND CHAOS. 22, 9, 1250223.

Research output: Contribution to journal › Article › Scientific › peer-review

Automatization and stress analysis data of CoCr laser weld fatigue tests

Kanerva, M., Besharat, Z., Pärnänen, T., Jokinen, J., Honkanen, M., Sarlin, E., Göthelid, M. & Schlenzka, D., 1 Oct 2019, In : Data in Brief. 26, 104374.

Research output: Contribution to journal › Article › Scientific › peer-review

Changes in hemodynamics associated with metabolic syndrome are more pronounced in women than in men

Kangas, P., Tikkakoski, A., Kettunen, J., Eräranta, A., Huhtala, H., Kähönen, M., Sipilä, K., Mustonen, J. & Pörsti, I., 5 Dec 2019, In : Scientific Reports. 9, 1, 11 p., 18377.

Research output: Contribution to journal › Article › Scientific › peer-review

N-Glycosylation as determinant of epidermal growth factor receptor conformation in membranes

Kaszuba, K., Grzybek, M., Orłowski, A., Danne, R., Róg, T., Simons, K., Coskun, Ü. & Vattulainen, I., 7 Apr 2015, In : Proceedings of the National Academy of Sciences of the United States of America. 112, 14, p. 4334-4339 6 p.

Research output: Contribution to journal › Article › Scientific › peer-review

Väitöstilaisuus yliopiston imagonluojana

Katko, T. S., May 2017, In : Tiedepolitiikka. 42, 1, p. 63-64 2 p.

Research output: Contribution to journal › Comment/debate › Scientific

Optimized dispersion quality of aqueous carbon nanotube colloids as a function of sonochemical yield and surfactant/CNT ratio

Keinänen, P., Siljander, S., Koivula, M., Sethi, J., Sarlin, E., Vuorinen, J. & Kanerva, M., 1 Sep 2018, In : Heliyon. 4, 9, 15 p., e00787.

Research output: Contribution to journal › Article › Scientific › peer-review

Scaling and correlation properties of RR and QT intervals at the cellular level

Kim, J., Shah, D., Potapov, I., Latukka, J., Aalto-Setälä, K. & Räsänen, E., 2019, In : Scientific Reports. 9, 1, 3651.

Research output: Contribution to journal › Article › Scientific › peer-review

Personalized Monitoring and Advance Warning System for Cardiac Arrhythmias

Kiranyaz, S., Ince, T. & Gabbouj, M., 1 Dec 2017, In : Scientific Reports. 7, 1, 9270.

Research output: Contribution to journal › Article › Scientific › peer-review

Gaussian Light Model in Brightfield Optical Projection Tomography

Koskela, O., Montonen, T., Belay, B., Figueiras, E., Pursiainen, S. & Hyttinen, J., 26 Sep 2019, In : Scientific Reports. 9, 1

Research output: Contribution to journal › Article › Scientific › peer-review

Real-time characterization of spectral instabilities in a mode-locked fibre laser exhibiting soliton-similariton dynamics

Lapre, C., Billet, C., Meng, F., Ryczkowski, P., Sylvestre, T., Finot, C., Genty, G. & Dudley, J. M., 27 Sep 2019, In : Scientific Reports. 9, 1

Research output: Contribution to journal › Article › Scientific › peer-review

Using multi-step proposal distribution for improved MCMC convergence in Bayesian network structure learning

Larjo, A. & Lähdesmäki, H., 27 Dec 2015, In : Eurasip Journal on Bioinformatics and Systems Biology. 2015, 1, 6.

Research output: Contribution to journal › Article › Scientific › peer-review

Quasi two-dimensional astigmatic solitons in soft chiral metastructures

Laudyn, U. A., Jung, P. S., Karpierz, M. A. & Assanto, G., 15 Mar 2016, In : Scientific Reports. 6, 22923.

Research output: Contribution to journal › Article › Scientific › peer-review

Curved optical solitons subject to transverse acceleration in reorientational soft matter

Laudyn, U. A., Kwaśny, M., Sala, F. A., Karpierz, M. A., Smyth, N. F. & Assanto, G., 1 Dec 2017, In : Scientific Reports. 7, 1, 12385.

Research output: Contribution to journal › Article › Scientific › peer-review

Multicomponent new particle formation from sulfuric acid, ammonia, and biogenic vapors

Lehtipalo, K., Yan, C., Dada, L., Bianchi, F., Xiao, M., Wagner, R., Stolzenburg, D., Ahonen, L. R., Amorim, A., Baccarini, A., Bauer, P. S., Baumgartner, B., Bergen, A., Bernhammer, A. K., Breitenlechner, M., Brilke, S., Buchholz, A., Mazon, S. B., Chen, D., Chen, X., Dias, A., Dommen, J., Draper, D. C., Duplissy, J., Ehn, M., Finkenzeller, H., Fischer, L., Frege, C., Fuchs, C., Garmash, O., Gordon, H., Hakala, J., He, X., Heikkinen, L., Heinritzi, M., Helm, J. C., Hofbauer, V., Hoyle, C. R., Jokinen, T., Kangasluoma, J., Kerminen, V. M., Kim, C., Kirkby, J., Kontkanen, J., Kürten, A., Lawler, M. J., Mai, H., Mathot, S., Nieminen, T. & Virtanen, A., 12 Dec 2018, In : Science Advances. 4, 12, eaau5363.

Research output: Contribution to journal › Article › Scientific › peer-review

Structure and permeation mechanism of a mammalian urea transporter

Levin, E. J., Cao, Y., Enkavi, G., Quick, M., Pan, Y., Tajkhorshid, E. & Zhou, M., 10 Jul 2012, In : Proceedings of the National Academy of Sciences of the United States of America. 109, 28, p. 11194-11199 6 p.

Research output: Contribution to journal › Article › Scientific › peer-review

Transient formation of water-conducting states in membrane transporters

Li, J., Shaikh, S. A., Enkavi, G., Wen, P. C., Huang, Z. & Tajkhorshid, E., 7 May 2013, In : Proceedings of the National Academy of Sciences of the United States of America. 110, 19, p. 7696-7701 6 p.

Research output: Contribution to journal › Article › Scientific › peer-review

Human iPSC derived disease model of MERTK-associated retinitis pigmentosa

Lukovic, D., Castro, A. A., Delgado, A. B. G., Bernal, M. D. L. A. M., Pelaez, N. L., Lloret, A. D., Espejo, R. P., Kamenarova, K., Sánchez, L. F., Cuenca, N., Cortón, M., Fernandez, A. A., Sorkio, A., Skottman, H., Ayuso, C., Erceg, S. & Bhattacharya, S. S., 11 Aug 2015, In : Scientific Reports. 5, 12910.

Research output: Contribution to journal › Article › Scientific › peer-review

Rate-limiting steps in transcription dictate sensitivity to variability in cellular components

Mäkelä, J., Kandavalli, V. & Ribeiro, A. S., 1 Dec 2017, In : Scientific Reports. 7, 1, 10588.

Research output: Contribution to journal › Article › Scientific › peer-review

Tooth wear and dentoalveolar remodeling are key factors of morphological variation in the Dmanisi mandibles

Margvelashvili, A., Zollikofer, C. P. E., Lordkipanidze, D., Peltomäki, T. & De León, M. S. P., 22 Oct 2013, In : Proceedings of the National Academy of Sciences of the United States of America. 110, 43, p. 17278-17283 6 p.

Research output: Contribution to journal › Article › Scientific › peer-review

Caustics and rogue waves in an optical sea

Mathis, A., Froehly, L., Toenger, S., Dias, F., Genty, G. & Dudley, J. M., 6 Aug 2015, In : Scientific Reports. 5, 12822.

Research output: Contribution to journal › Article › Scientific › peer-review

Comparative proteomics reveals human pluripotent stem cell-derived limbal epithelial stem cells are similar to native ocular surface epithelial cells

Mikhailova, A., Jylhä, A., Rieck, J., Nättinen, J., Ilmarinen, T., Veréb, Z., Aapola, U., Beuerman, R., Petrovski, G., Uusitalo, H. & Skottman, H., 1 Oct 2015, In : Scientific Reports. 5, 14684.

Research output: Contribution to journal › Article › Scientific › peer-review

Glucosylceramide modifies the LPS-induced inflammatory response in macrophages and the orientation of the LPS/TLR4 complex in silico

Mobarak, E., Håversen, L., Manna, M., Rutberg, M., Levin, M., Perkins, R., Rog, T., Vattulainen, I. & Borén, J., 1 Dec 2018, In : Scientific Reports. 8, 1, 13600.

Research output: Contribution to journal › Article › Scientific › peer-review

Dynamical heart beat correlations during running

Molkkari, M., Angelotti, G., Emig, T. & Räsänen, E., 2020, In : Scientific Reports. 10, 1, 9 p., 13627.

Research output: Contribution to journal › Article › Scientific › peer-review

Ricci-flow based conformal mapping of the proximal femur to identify exercise loading effects

Narra, N., Abe, S., Dimitrov, V., Nikander, R., Kouhia, R., Sievänen, H. & Hyttinen, J., 2018, In : Scientific Reports. 8, 1, 4823.

Research output: Contribution to journal › Article › Scientific › peer-review

1700 nm dispersion managed mode-locked bismuth fiber laser

Noronen, T., Firstov, S., Dianov, E. & Okhotnikov, O. G., 21 Apr 2016, In : Scientific Reports. 6, 24876.

Research output: Contribution to journal › Article › Scientific › peer-review

An ensemble of classifiers based on different texture descriptors for texture classification

Paci, M., Nanni, L. & Severi, S., Jul 2013, In : Journal of King Saud University - Science. 25, 3, p. 235-244 10 p.

Research output: Contribution to journal › Article › Scientific › peer-review

Interleukin-6 and microRNA profiles induced by oral bacteria in human atheroma derived and healthy smooth muscle cells

Pessi, T., Viiri, L. E., Raitoharju, E., Astola, N., Seppälä, I., Waldenberger, M., Lounatmaa, K., Davies, A. H., Lehtimäki, T., Karhunen, P. J. & Monaco, C., 1 Dec 2015, In : SpringerPlus. 4, 1

Research output: Contribution to journal › Article › Scientific › peer-review

Selective effect of cell membrane on synaptic neurotransmission

Postila, P. A., Vattulainen, I. & Róg, T., 19 Jan 2016, In : Scientific Reports. 6, 19345.

Research output: Contribution to journal › Article › Scientific › peer-review

Atomistic determinants of co-enzyme Q reduction at the Q_i-site of the cytochrome bc₁ complex

Postila, P. A., Kaszuba, K., Kuleta, P., Vattulainen, I., Sarewicz, M., Osyczka, A. & Róg, T., 26 Sep 2016, In : Scientific Reports. 6, 33607.

Research output: Contribution to journal › Article › Scientific › peer-review

Information transfer in QT-RR dynamics: Application to QT-correction

Potapov, I., Latukka, J., Kim, J., Luukko, P., Aalto-Setälä, K. & Räsänen, E., 1 Dec 2018, In : Scientific Reports. 8, 1, 9 p., 14992.

Research output: Contribution to journal › Article › Scientific › peer-review

Added value of autoregulation and multi-step kinetics of transcription initiation

Prajapat, M. K. & Ribeiro, A. S., 1 Nov 2018, In : Royal Society Open Science. 5, 11, 181170.

Research output: Contribution to journal › Article › Scientific › peer-review

Variance-corrected Michaelis-Menten equation predicts transient rates of single-enzyme reactions and response times in bacterial gene-regulation

Pulkkinen, O. & Metzler, R., 4 Dec 2015, In : Scientific Reports. 5, 17820.

Research output: Contribution to journal › Article › Scientific › peer-review

Non-toxic printed supercapacitors operating in sub-zero conditions

Railanmaa, A., Lehtimäki, S., Keskinen, J. & Lupo, D., 1 Oct 2019, In : Scientific Reports. 9, 1, 14059.

Research output: Contribution to journal › Article › Scientific › peer-review

Skin-conformable printed supercapacitors and their performance in wear

Railanmaa, A., Soltani, A., Lehtimäki, S., Pournoori, N., Keskinen, J., Hokka, M. & Lupo, D., 2020, In : Scientific Reports. 10, 1, 9 p., 15194.

Research output: Contribution to journal › Article › Scientific › peer-review

A Highly Efficient Sensor Platform Using Simply Manufactured Nanodot Patterned Substrates

Rasappa, S., Ghoshal, T., Borah, D., Senthamaraikannan, R., Holmes, J. D. & Morris, M. A., 20 Aug 2015, In : Scientific Reports. 5, 13270.

Research output: Contribution to journal › Article › Scientific › peer-review

Highly-Sensitive Refractive Index Sensing by Near-infrared Metatronic Nanocircuits

Rashed, A. R., Gudulluoglu, B., Yun, H. W., Habib, M., Boyaci, I. H., Hong, S. H., Ozbay, E. & Caglayan, H., 1 Dec 2018, In : Scientific Reports. 8, 1, 11457.

Research output: Contribution to journal › Article › Scientific › peer-review

Superdiffusion dominates intracellular particle motion in the supercrowded cytoplasm of pathogenic Acanthamoeba castellanii

Reverey, J. F., Jeon, J-H., Bao, H., Leippe, M., Metzler, R. & Selhuber-Unkel, C., 30 Jun 2015, In : Scientific Reports. 5, 11690.

Research output: Contribution to journal › Article › Scientific › peer-review

Infiltrated bunch of solitons in Bi-doped frequency-shifted feedback fibre laser operated at 1450 nm

Rissanen, J., Korobko, D. A., Zolotovsky, I. O., Melkumov, M., Khopin, V. F. & Gumenyuk, R., 10 Mar 2017, In : Scientific Reports. 7, 44194.

Research output: Contribution to journal › Article › Scientific › peer-review

Traffic is a major source of atmospheric nanocluster aerosol

Rönkkö, T., Kuuluvainen, H., Karjalainen, P., Keskinen, J., Hillamo, R., Niemi, J. V., Pirjola, L., Timonen, H. J., Saarikoski, S., Saukko, E., Järvinen, A., Silvennoinen, H., Rostedt, A., Olin, M., Yli-Ojanperä, J., Nousiainen, P., Kousa, A. & Dal Maso, M., 18 Jul 2017, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 29, p. 7549-7554 6 p.

Research output: Contribution to journal › Article › Scientific › peer-review

Trends for isolated amino acids and dipeptides: Conformation, divalent ion binding, and remarkable similarity of binding to calcium and lead

Ropo, M., Blum, V. & Baldauf, C., 3 Nov 2016, In : Scientific Reports. 6, 35772.

Research output: Contribution to journal › Article › Scientific › peer-review

Molecular mechanisms of Charcot-Marie-Tooth neuropathy linked to mutations in human myelin protein P2

Ruskamo, S., Nieminen, T., Kristiansen, C. K., Vatne, G. H., Baumann, A., Hallin, E. I., Raasakka, A., Joensuu, P., Bergmann, U., Vattulainen, I. & Kursula, P., 1 Dec 2017, In : Scientific Reports. 7, 1, 6510.

Research output: Contribution to journal › Article › Scientific › peer-review

Machine learning analysis of rogue solitons in supercontinuum generation

Salmela, L., Lapre, C., Dudley, J. M. & Genty, G., 2020, In : Scientific Reports. 10, 9596.

Research output: Contribution to journal › Article › Scientific › peer-review

Optical detection of radon decay in air

Sand, J., Ihantola, S., Peräjärvi, K., Toivonen, H. & Toivonen, J., 12 Feb 2016, In : Scientific Reports. 6, 21532.

Research output: Contribution to journal › Article › Scientific › peer-review

Segmented molecular design of self-healing proteinaceous materials

Sariola, V., Pena-Francesch, A., Jung, H., Çetinkaya, M., Pacheco, C., Sitti, M. & Demirel, M. C., 1 Sep 2015, In : Scientific Reports. 5, 13482.

Research output: Contribution to journal › Article › Scientific › peer-review

Porous poly-L-lactide-co-1-caprolactone scaffold: A novel biomaterial for vaginal tissue engineering

Sartoneva, R., Kuismanen, K., Juntunen, M., Karjalainen, S., Hannula, M., Kyllönen, L., Hyttinen, J., Huhtala, H., Paakinaho, K. & Miettinen, S., 1 Aug 2018, In : Royal Society Open Science. 5, 8, 180811.

Research output: Contribution to journal › Article › Scientific › peer-review

Mechanistic principles underlying regulation of the actin cytoskeleton by phosphoinositides

Senju, Y., Kalimeri, M., Koskela, E. V., Somerharju, P., Zhao, H., Vattulainen, I. & Lappalainen, P., 24 Oct 2017, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 43, p. E8977-E8986

Research output: Contribution to journal › Article › Scientific › peer-review

Bioinspired underwater locomotion of light-driven liquid crystal gels

Shahsavan, H., Aghakhani, A., Zeng, H., Guo, Y., Davidson, Z. S., Priimägi, A. & Sitti, M., 10 Mar 2020, In : Proceedings of the National Academy of Sciences of the United States of America. 117, 10, p. 5125-5133 9 p.

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Proton-coupled electron transfer and the role of water molecules in proton pumping by cytochrome c oxidase

Sharma, V., Enkavi, G., Vattulainen, I., Róg, T. & Wikström, M., 17 Feb 2015, In : Proceedings of the National Academy of Sciences of the United States of America. 112, 7, p. 2040-2045 6 p.

Research output: Contribution to journal › Article › Scientific › peer-review

Redox-induced activation of the proton pump in the respiratory complex I

Sharma, V., Belevich, G., Gamiz-Hernandez, A. P., Róg, T., Vattulainen, I., Verkhovskaya, M. L., Wikström, M., Hummer, G. & Kaila, V. R. I., 15 Sep 2015, In : Proceedings of the National Academy of Sciences of the United States of America. 112, 37, p. 11571-11576 6 p.

Research output: Contribution to journal › Article › Scientific › peer-review

An Optical Method for the In-Vivo Characterization of the Biomechanical Response of the Right Ventricle

Soltani, A., Lahti, J., Järvelä, K., Curtze, S., Laurikka, J., Hokka, M. & Kuokkala, V. T., 1 Dec 2018, In : Scientific Reports. 8, 1, 6831.

Research output: Contribution to journal › Article › Scientific › peer-review

Automatic knee osteoarthritis diagnosis from plain radiographs: A deep learning-based approach

Tiulpin, A., Thevenot, J., Rahtu, E., Lehenkari, P. & Saarakkala, S., 1 Dec 2018, In : Scientific Reports. 8, 1, 1727.

Research output: Contribution to journal › Article › Scientific › peer-review

Multimodal Machine Learning-based Knee Osteoarthritis Progression Prediction from Plain Radiographs and Clinical Data

Tiulpin, A., Klein, S., Bierma-Zeinstra, S. M. A., Thevenot, J., Rahtu, E., Meurs, J. V., Oei, E. H. G. & Saarakkala, S., 1 Dec 2019, In : Scientific Reports. 9, 1, 20038.

Research output: Contribution to journal › Article › Scientific › peer-review

Emergent rogue wave structures and statistics in spontaneous modulation instability

Toenger, S., Godin, T., Billet, C., Dias, F., Erkintalo, M., Genty, G. & Dudley, J. M., 20 May 2015, In : Scientific Reports. 5, 10380.

Research output: Contribution to journal › Article › Scientific › peer-review

Sub-parts-per-trillion level sensitivity in trace gas detection by cantilever-enhanced photo-acoustic spectroscopy

Tomberg, T., Vainio, M., Hieta, T. & Halonen, L., 2018, In : Scientific Reports. 8, 1, 1848.

Research output: Contribution to journal › Article › Scientific › peer-review

Extensive transduction of nonrepetitive DNA mediated by L1 retrotransposition in cancer genomes

Tubio, J. M. C., Li, Y., Ju, Y. S., Martincorena, I., Cooke, S. L., Tojo, M., Gundem, G., Pipinikas, C. P., Zamora, J., Raine, K., Menzies, A., Roman-Garcia, P., Fullam, A., Gerstung, M., Shlien, A., Tarpey, P. S., Papaemmanuil, E., Knappskog, S., Van Loo, P., Ramakrishna, M., Davies, H. R., Marshall, J., Wedge, D. C., Teague, J. W., Butler, A. P., Nik-Zainal, S., Alexandrov, L., Behjati, S., Yates, L. R., Bolli, N., Mudie, L., Hardy, C., Martin, S., McLaren, S., O'Meara, S., Anderson, E., Maddison, M., Gamble, S., Foster, C., Warren, A. Y., Whitaker, H., Brewer, D., Eeles, R., Cooper, C., Neal, D., Lynch, A. G., Visakorpi, T., Isaacs, W. B., Van't Veer, L., Caldas, C., Desmedt, C., Sotiriou, C., Aparicio, S., Foekens, J. A., Eyfjörd, J. E., Lakhani, S. R., Thomas, G., Myklebost, O., Span, P. N., Børresen-Dale, A. L., Richardson, A. L., Van De Vijver, M., Vincent-Salomon, A., Van Den Eynden, G. G., Flanagan, A. M., Futreal, P. A., Janes, S. M., Bova, G. S., Stratton, M. R., McDermott, U. & Campbell, P. J., 1 Aug 2014, In : Science. 345, 6196, 1251343.

Research output: Contribution to journal › Review Article › Scientific › peer-review

Genomically amplified Akt3 activates DNA repair pathway and promotes glioma progression

Turner, K. M., Sun, Y., Ji, P., Granberg, K. J., Bernard, B., Hu, L., Cogdell, D. E., Zhou, X., Yli-Harja, O., Nykter, M., Shmulevich, I., Yung, W. K. A., Fuller, G. N. & Zhang, W., 17 Mar 2015, In : Proceedings of the National Academy of Sciences of the United States of America. 112, 11, p. 3421-3426 6 p.

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Behaviour of one-step spray-coated carbon nanotube supercapacitor in ambient light harvester circuit with printed organic solar cell and electrochromic display

Tuukkanen, S., Välimäki, M., Lehtimäki, S., Vuorinen, T. & Lupo, D., 9 Mar 2016, In : Scientific Reports. 6, 22967.

Research output: Contribution to journal › Article › Scientific › peer-review

Analysis of spatial heterogeneity in normal epithelium and preneoplastic alterations in mouse prostate tumor models

Valkonen, M., Ruusuvuori, P., Kartasalo, K., Nykter, M., Visakorpi, T. & Latonen, L., 20 Mar 2017, In : Scientific Reports. 7, 44831.

Research output: Contribution to journal › Article › Scientific › peer-review

Three-Dimensional Printing of the Nasal Cavities for Clinical Experiments

Valtonen, O., Ormiskangas, J., Kivekäs, I., Rantanen, V., Dean, M., Poe, D., Järnstedt, J., Lekkala, J., Saarenrinne, P. & Rautiainen, M., 16 Jan 2020, In : Scientific Reports. 10, 7 p., 502.

Research output: Contribution to journal › Article › Scientific › peer-review

Comparison of electron injection and recombination on TiO₂ nanoparticles and ZnO nanorods photosensitized by phthalocyanine

Virkki, K., Tervola, E., Ince, M., Torres, T. & Tkachenko, N. V., 11 Jul 2018, In : Royal Society Open Science. 5, 7, 180323.

Research output: Contribution to journal › Article › Scientific › peer-review

X-ray microtomography is a novel method for accurate evaluation of small-bowel mucosal morphology and surface area

Virta, J., Hannula, M., Tamminen, I., Lindfors, K., Kaukinen, K., Popp, A., Taavela, J., Saavalainen, P., Hiltunen, P., Hyttinen, J. & Kurppa, K., 2020, In : Scientific Reports. 10, 1, 11 p., 13164.

Research output: Contribution to journal › Article › Scientific › peer-review

Rapid growth of new atmospheric particles by nitric acid and ammonia condensation

Wang, M., Kong, W., Marten, R., He, X. C., Chen, D., Pfeifer, J., Heitto, A., Kontkanen, J., Dada, L., Kürten, A., Yli-Juuti, T., Manninen, H. E., Amanatidis, S., Amorim, A., Baalbaki, R., Baccarini, A., Bell, D. M., Bertozzi, B., Bräkling, S., Brilke, S., Murillo, L. C., Chiu, R., Chu, B., De Menezes, L. P., Duplissy, J., Finkenzeller, H., Carracedo, L. G., Granzin, M., Guida, R., Hansel, A., Hofbauer, V., Krechmer, J., Lehtipalo, K., Lamkaddam, H., Lampimäki, M., Lee, C. P., Makhmutov, V., Marie, G., Mathot, S., Mauldin, R. L., Mentler, B., Müller, T., Onnela, A., Partoll, E., Petäjä, T., Philippov, M., Pospisilova, V., Ranjithkumar, A., Rissanen, M., Rörup, B., Scholz, W., Shen, J., Simon, M., Sipilä, M., Steiner, G., Stolzenburg, D., Tham, Y. J., Tomé, A., Wagner, A. C., Wang, D. S., Wang, Y., Weber, S. K., Winkler, P. M., Wlasits, P. J., Wu, Y., Xiao, M., Ye, Q., Zauner-Wieczorek, M., Zhou, X., Volkamer, R., Riipinen, I., Dommen, J., Curtius, J., Baltensperger, U., Kulmala, M., Worsnop, D. R., Kirkby, J., Seinfeld, J. H., El-Haddad, I., Flagan, R. C. & Donahue, N. M., 14 May 2020, In : Nature. 581, 7807, p. 184-189 6 p.

Research output: Contribution to journal › Article › Scientific › peer-review

Redox-coupled quinone dynamics in the respiratory complex I

Warnau, J., Sharma, V., Gamiz-Hernandez, A. P., Luca, A. D., Haapanen, O., Vattulainen, I., Wikström, M., Hummer, G. & Kaila, V. R. I., 4 Sep 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 36, p. E8413-E8420

Research output: Contribution to journal › Article › Scientific › peer-review

Insulin resistance is associated with altered amino acid metabolism and adipose tissue dysfunction in normoglycemic women

Wiklund, P., Zhang, X., Pekkala, S., Autio, R., Kong, L., Yang, Y., Keinänen-Kiukaanniemi, S., Alen, M. & Cheng, S., 15 Apr 2016, In : Scientific Reports. 6, 24540.

Research output: Contribution to journal › Article › Scientific › peer-review

Mechanism of homodimeric cytokine receptor activation and dysregulation by oncogenic mutations

Wilmes, S., Hafer, M., Vuorio, J., Tucker, J. A., Winkelmann, H., Löchte, S., Stanly, T. A., Pulgar Prieto, K. D., Poojari, C., Sharma, V., Richter, C. P., Kurre, R., Hubbard, S. R., Christopher Garcia, K., Moraga, I., Vattulainen, I., Hitchcock, I. S. & Piehler, J., 7 Feb 2020, In : Science. 367, 6478, p. 643-652 10 p.

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Combining deep learning with token selection for patient phenotyping from electronic health records

Yang, Z., Dehmer, M., Yli-Harja, O. & Emmert-Streib, F., 2020, In : Scientific Reports. 10, 1, 18 p., 1432.

Research output: Contribution to journal › Article › Scientific › peer-review

Active optical clock based on four-level quantum system

Zhang, T. G., Wang, Y. F., Zang, X. R., Zhuang, W. & Chen, J. B., Jun 2013, In : Chinese Science Bulletin. 58, 17, p. 2033-2038 6 p.

Research output: Contribution to journal › Article › Scientific › peer-review