Tampere University of Technology

TUTCRIS Research Portal

Publications

  1. Published

    Training based cell detection from bright-field microscope images

    Tikkanen, T., Ruusuvuori, P., Latonen, L. & Huttunen, H., 2015, 2015 9th International Symposium on Image and Signal Processing and Analysis (ISPA). September 7-9, 2015, Zagreb, Croatia. IEEE, p. 160-164 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  2. Published

    Complexity Reduction Opportunities in the Future VVC Intra Encoder

    Tissier, A., Mercat, A., Amestoy, T., Hamidouche, W., Vanne, J. & Menard, D., Sep 2019, 2019 IEEE 21st International Workshop on Multimedia Signal Processing (MMSP). IEEE, 6 p. (IEEE International Workshop on Multimedia Signal Processing).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  3. Published

    Automatic knee osteoarthritis diagnosis from plain radiographs: A deep learning-based approach

    Tiulpin, A., Thevenot, J., Rahtu, E., Lehenkari, P. & Saarakkala, S., 1 Dec 2018, In : Scientific Reports. 8, 1, 1727.

    Research output: Contribution to journalArticleScientificpeer-review

  4. Published

    Multimodal Machine Learning-based Knee Osteoarthritis Progression Prediction from Plain Radiographs and Clinical Data

    Tiulpin, A., Klein, S., Bierma-Zeinstra, S. M. A., Thevenot, J., Rahtu, E., Meurs, J. V., Oei, E. H. G. & Saarakkala, S., 1 Dec 2019, In : Scientific Reports. 9, 1, 20038.

    Research output: Contribution to journalArticleScientificpeer-review

  5. Published

    Maze -- Moodle Module for Games of Exercises

    Tiusanen, M. & Lahtinen, R., 2011, 11th Koli Calling International Conference on Computing Education Research, November 17th to 20th, 2011, Koli National Park, Finland. ACM, p. 76-82 (Koli Calling International Conference on Computing Education Research).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  6. Published

    ADisc- a pipeline for adaptive Disconnection based brain hemisphere segmentation in 3D MRI

    Tohka, J. & Zhao, L., 2011, Human Brain Mapping HBM 2011 17th Annual Meeting of the Organization on Human Brain Mapping, Quebec City, Canada, June 26-30, 2011. Quebec City,: Organization on Human Brain Mapping, p. 1-2 2 p. (Annual Meeting of the Organization on Human Brain Mapping HBM).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientific

  7. Published

    Brain MRI tissue classification based on local Markov random fields

    Tohka, J., Dinov, I. D., Shattuck, D. W. & Toga, A. W., 2010, In : Magnetic Resonance Imaging. 28, 4, p. 557-573

    Research output: Contribution to journalArticleScientificpeer-review

  8. Published

    FAST-PVE: Extremely fast Markov random field based brain MRI tissue classification

    Tohka, J., 2013, 18th Scandinavian Conference on Image Analysis, SCIA 2013, Espoo, Finland, 17.-20.6.2013. Kämäräinen, J-K. & Koskela, M. (eds.). Berlin: Springer, p. 266-276 11 p. (Lecture Notes in Computer Science; vol. 7944).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  9. Published

    The Impact of Sampling Density Upon Cortical Network Analysis: Regions or Points

    Tohka, J., He, Y. & Evans, A. C., 2012, In : Magnetic Resonance Imaging. 30, 7, p. 978-992

    Research output: Contribution to journalArticleScientificpeer-review

  10. Published

    Editorial article: Imaging brain change across different time scales

    Tohka, J. (ed.) & Ruotsalainen, U. (ed.), 2012, Frontiers Research Foundation. 2 p. (Frontiers in Neuroinformatics; vol. 6, no. 29)

    Research output: Book/ReportAnthologyScientificpeer-review

  11. Published

    Partial volume effect modeling for segmentation and tissue classification of brain magnetic resonance images: A review

    Tohka, J., 2014, In : World journal of radiology. 28, 6, p. 855-864 9 p., 11.

    Research output: Contribution to journalReview ArticleScientificpeer-review

  12. Published

    Rigid-Body Registration

    Tohka, J., 14 Feb 2015, Brain Mapping: An Encyclopedic Reference. Elsevier, Vol. 1. p. 301-305 5 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

  13. Published

    Comparison of Feature Selection Techniques in Machine Learning for Anatomical Brain MRI in Dementia

    Tohka, J., Moradi, E., Huttunen, H., Alzheimer’s Disease Neuroimaging Initiative & Alzheimer’s Disease Neuroimaging Initiative 2, 2016, In : Neuroinformatics. 14, 3, p. 279-296 18 p.

    Research output: Contribution to journalArticleScientificpeer-review

  14. Published

    Effects of Transmitters and Amyloid-Beta Peptide on Calcium Signals in Rat Cortical Astrocytes: Fura-2AM Measurements and Stochastic Model Simulations

    Toivari, E., Manninen, T., Nahata, A. K., Jalonen, T. O. & Linne, M-L., 2011, In : PLoS ONE. 6, 3, p. 1-9 9 p., e17914.

    Research output: Contribution to journalArticleScientificpeer-review

  15. Published

    Contribution Of SERCA And IP3 Sensitivity to Calcium Signaling in Astrocytes: A Computational Study

    Toivari, E., Hituri, K., Manninen, T., Jalonen, T. O. & Linne, M-L., 2011, In : BMC Neuroscience. 12, Suppl 1, p. 1-2 2 p., P201.

    Research output: Contribution to journalMeeting AbstractScientificpeer-review

  16. Published

    Calcium signaling in astrocytes: modeling Fura-2AM measurements

    Toivari, E., Manninen, T., Nahata, A. K., Jalonen, T. O. & Linne, M-L., 2010, In : Frontiers in Neuroscience. 1 p.

    Research output: Contribution to journalMeeting AbstractScientificpeer-review

  17. Published

    Information Modelling and Knowledge Bases XXV

    Tokuda, T. (ed.), Kiyoki, Y. (ed.), Jaakkola, H. (ed.) & Yoshida, N. (ed.), 2014, Amsterdam: IOS Press. (Frontiers in Artificial Intelligence and Applications; vol. 260)

    Research output: Book/ReportAnthologyScientificpeer-review

  18. Published

    Implementing a Microservices System with Blockchain Smart Contracts

    Tonelli, R., Lunesu, M. I., Pinna, A., Taibi, D. & Marchesi, M., 14 Mar 2019, 2019 IEEE International Workshop on Blockchain Oriented Software Engineering (IWBOSE). IEEE, p. 22-31 10 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  19. Published

    Likes and views: Investigating internet video content creators perceptions of popularity

    Törhönen, M., Sjöblom, M. & Hamari, J., 2018, Proceedings of the 2nd International GamiFIN conference. CEUR-WS, p. 108-114 7 p. (CEUR Workshop Proceedings; vol. 2186).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  20. E-pub ahead of print

    Fame and fortune, or just fun? A study on why people create content on video platforms

    Törhönen, M., Sjöblom, M., Hassan, L. & Hamari, J., 31 Jul 2019, In : INTERNET RESEARCH.

    Research output: Contribution to journalArticleScientificpeer-review

  21. Published

    Morphological Area Gradient: System-independent Dense Tissue Segmentation in Mammography Images

    Torres, G. F., Sassi, A., Arponen, O., Holli-Helenius, K., Lääperi, A-L., Rinta-Kiikka, I., Kämäräinen, J. & Pertuz, S., 7 Oct 2019, 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC). IEEE, p. 4855-4858 4 p. (Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  22. Published

    Strengthening social ties via ICT in the organization

    Torro, O. & Pirkkalainen, H., 2017, Proceedings of the 50th Hawaii International Conference on System Sciences: January 4-7, 2017, Waikoloa, Hawaii.. p. 5511-5520 10 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  23. Published

    Integrating micro-level interactions with social network analysis in tie strength research: the edge-centered approach

    Torro, O., Gupta, J., Kärkkäinen, H., Pirkkalainen, H., Vatrapu, R., Mukkamala, R. & Hussein, A., 22 Oct 2017, Proceedings of the 21st International Academic Mindtrek Conference: Sept. 20th-21st, 2017, Tampere, Finland. Turunen, M. & Väätäjä, H. (eds.). ACM, p. 203-209 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  24. Published

    Application of time-frequency analysis to non-stationary and multicomponent signals

    Totsky, A. V., Astola, J. T. & Polotska, O. A., 2017, In : Telecommunications and Radio Engineering (English translation of Elektrosvyaz and Radiotekhnika). 76, 5, p. 443-459 17 p.

    Research output: Contribution to journalArticleScientificpeer-review

  25. Published

    Effects of inducer intake kinetics on the dynamics of gene expression

    Tran, H. & Ribeiro, A. S., 2013, Advances in Artificial Life, ECAL 2013, Proceedings of the twelfth European Conference on the Synthesis and Simulation of Living Systems, 2-6 September 2013, Taormina, Italy. p. 1174-1181 8 p. (European Conference on the Synthesis and Simulation of Living Systems).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  26. Published

    Kinetics of the cellular intake of a gene expression inducer at high concentrations

    Tran, H., Oliveira, S. M. D. D., Goncalves, N. & Ribeiro, A. S., 20 Jul 2015, In : Molecular Biosystems. 11, 9, p. 2579-2587 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  27. Published

    Environment-sensing Mechanisms of Gene Expression and their Effects on the Dynamics of Genetic Circuits across Cell Generations

    Tran, H., 25 Jan 2016, Tampere University of Technology. 65 p. (Tampere University of Technology. Publication; vol. 1367)

    Research output: Book/ReportDoctoral thesisCollection of Articles

  28. Published

    An estimation method of the kinetic rates of transcription initiation by Eσ70 and Eσ38 from measurements of individual RNA productions

    Tran, H. & Ribeiro, A. S., 6 Sep 2015, In : International Journal of Pharma Medicine and Biological Sciences. 4, 3, p. 151-157 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  29. Published

    Improving efficiency in convolutional neural networks with multilinear filters

    Tran, D. T., Iosifidis, A. & Gabbouj, M., 1 Sep 2018, In : Neural Networks. 105, p. 328-339 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  30. Published

    Sample-based regularization for support vector machine classification

    Tran, D. T., Waris, M. A., Gabbouj, M. & Iosifidis, A., 8 Mar 2018, Proceedings of the 7th International Conference on Image Processing Theory, Tools and Applications, IPTA 2017. IEEE, p. 1-6 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  31. Published

    Toward efficient many-core scheduling of partial expansion graphs

    Tran, H. N., Bhattacharyya, S. S., Talpin, J. P. & Gautier, T., 28 May 2018, Proceedings of the 21st International Workshop on Software and Compilers for Embedded Systems, SCOPES 2018. Association for Computing Machinery, Inc, p. 100-103 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  32. Published

    Automatic Flower and Visitor Detection System

    Tran, D. T., Høye, T. T., Gabbouj, M. & Iosifidis, A., Sep 2018, 2018 26th European Signal Processing Conference (EUSIPCO). IEEE, p. 405-409 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  33. Accepted/In press

    PyGOP: A Python library for Generalized Operational Perceptron algorithms

    Tran, D. T., Kiranyaz, S., Gabbouj, M. & Iosifidis, A., 2019, (Accepted/In press) In : Knowledge-Based Systems.

    Research output: Contribution to journalArticleScientificpeer-review

  34. Published

    Knowledge Transfer for Face Verification Using Heterogeneous Generalized Operational Perceptrons

    Tran, D. T., Kiranyaz, S., Gabbouj, M. & Iosifidis, A., Sep 2019, 2019 IEEE International Conference on Image Processing (ICIP). IEEE, p. 1168-1172 5 p. (IEEE International Conference on Image Processing).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  35. E-pub ahead of print

    Heterogeneous Multilayer Generalized Operational Perceptron

    Tran, D. T., Kiranyaz, S., Gabbouj, M. & Iosifidis, A., 31 May 2019, In : IEEE Transactions on Neural Networks and Learning Systems . 15 p.

    Research output: Contribution to journalArticleScientificpeer-review

  36. Published

    Learning to Rank: A Progressive Neural Network Learning Approach

    Tran, D. T. & Iosifidis, A., 17 Apr 2019, ICASSP 2019 - 2019 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP). IEEE, p. 8355-8359 5 p. (IEEE International Conference on Acoustics, Speech and Signal Processing).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  37. E-pub ahead of print

    Progressive Operational Perceptrons with Memory

    Tran, D. T., Kiranyaz, S., Gabbouj, M. & Iosifidis, A., 31 Oct 2019, In : Neurocomputing.

    Research output: Contribution to journalArticleScientificpeer-review

  38. Early effects of imatinib mesylate on the expression of insulin-like growth factor binding proetein 3 and psitrom emission tomography in patients with gastrointestinal stromal tumor

    Trent, J. C., Ramdas, L., Dupart, J. J., Hunt, K., Oyedeji, C., Taylor, E. E., Hu, L., Chen, L. L., Benjamin, R. S., Pollock, R. & Zhang, W., 2006, In : Cancer. 107, 8, p. 1898-1908

    Research output: Contribution to journalArticleScientificpeer-review

  39. Imatinib mesylate: targeted therapy of gastrointestinal stromal tumor

    Trent, J., Dupart, J. & Zhang, W., 2005, In : Current Cancer Therapy Reviews. 1, p. 93-108 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  40. Molecular approaches to resolve diagnostic dilemmas: the case of gastrointestinal stromal tumor and leiomyosarcoma

    Trent, J., Lazar, A. J. F. & Zhang, W., 2007, In : Future Oncology. 3, 6, p. 629-637

    Research output: Contribution to journalArticleScientificpeer-review

  41. Published

    Comparison of module detection algorithms in protein networks and investigation of the biological meaning of predicted modules

    Tripathi, S., Moutari, S., Dehmer, M. & Emmert-Streib, F., 2016, In : BMC Bioinformatics. 17, 1, 129.

    Research output: Contribution to journalArticleScientificpeer-review

  42. Published

    Visualization of Biological Networks Using NetBioV

    Tripathi, S., Moutari, S., Dehmer, M. & Emmert-Streib, F., Oct 2016, Computational Network Analysis with R: Applications in Biology, Medicine, and Chemistry. Dehmer, M., Shi, Y. & Emmert-Streib, F. (eds.). Wiley-VCH, p. 307-333 27 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

  43. Published

    sgnesR: An R package for simulating gene expression data from an underlying real gene network structure considering delay parameters

    Tripathi, S., Lloyd-Price, J., Ribeiro, A., Yli-Harja, O., Dehmer, M. & Emmert-Streib, F., 4 Jul 2017, In : BMC Bioinformatics. 18, 1, 325.

    Research output: Contribution to journalArticleScientificpeer-review

  44. Published

    Eigen Posture Based Fall Risk Assessment System Using Kinect

    Tripathy, S. R., Chakravarty, K. & Sinha, A., 26 Oct 2018, 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2018. IEEE, Vol. 2018-July. p. 1-4 4 p. 8513263

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  45. Published

    Constrained Particle Filter for Improving Kinect Based Measurements

    Tripathy, S. R., Chakravarty, K. & Sinha, A., Sep 2018, 2018 26th European Signal Processing Conference (EUSIPCO). IEEE, p. 306-310 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  46. Published

    Learning Image-to-Image Translation Using Paired and Unpaired Training Samples

    Tripathy, S., Kannala, J. & Rahtu, E., 2019, Computer Vision - ACCV 2018 - 14th Asian Conference on Computer Vision, Revised Selected Papers. Jawahar, C. V., Schindler, K., Mori, G. & Li, H. (eds.). Springer Verlag, p. 51-66 16 p. (Lecture Notes in Computer Science; vol. 11362).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  47. Published

    ICface: Interpretable and controllable face reenactment using GANs

    Tripathy, S., Kannala, J. & Rahtu, E., 1 Mar 2020, 2020 IEEE Winter Conference on Applications of Computer Vision, WACV 2020. IEEE, p. 3374-3383 10 p. (IEEE Winter Conference on Applications of Computer Vision).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  48. Published

    Restoring Integral Images from Focal Stacks Using Compressed Sensing Techniques

    Trujillo-Sevilla, J. M., Katkovnik, V., Javidi, B. & Rodríguez-Ramos, J. M., 1 Jul 2016, In : Journal of Display Technology. 12, 7, p. 701-706 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  49. Published

    Using deep learning to detect price change indications in financial markets

    Tsantekidis, A., Passalis, N., Tefas, A., Kanniainen, J., Gabbouj, M. & Iosifidis, A., 2017, 25th European Signal Processing Conference: EUSIPCO 2017, Kos island, Greece, 28 Aug.-2 Sept. 2017. European Association for Signal Processing EURASIP

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  50. Published

    Forecasting stock prices from limit order book using convolutional neural networks

    Tsantekidis, A., Passalis, N., Tefas, A., Kanniainen, J., Gabbouj, M. & Iosifidis, A., 2017, 19th IEEE International Conference on Business Informatics: Thessaloniki, Greece, 24-27 July 2017. IEEE

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

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