Tampere University of Technology

TUTCRIS Research Portal

Publications

  1. 2015
  2. Published

    Hermitian one-particle density matrix through a semiclassical gradient expansion

    Bencheikh, K. & Räsänen, E., 9 Dec 2015, In : Journal of Physics A: Mathematical and Theoretical. 49, 1, 015205.

    Research output: Contribution to journalArticleScientificpeer-review

  3. Published

    Using multi-step proposal distribution for improved MCMC convergence in Bayesian network structure learning

    Larjo, A. & Lähdesmäki, H., 27 Dec 2015, In : Eurasip Journal on Bioinformatics and Systems Biology. 2015, 1, 6.

    Research output: Contribution to journalArticleScientificpeer-review

  4. 2016
  5. Published

    First-principles data set of 45,892 isolated and cation-coordinated conformers of 20 proteinogenic amino acids

    Ropo, M., Schneider, M., Baldauf, C. & Blum, V., 16 Feb 2016, In : Scientific Data. 3, 160009.

    Research output: Contribution to journalArticleScientificpeer-review

  6. Published

    Diffusion through thin membranes: Modeling across scales

    Aho, V., Mattila, K., Kühn, T., Kekäläinen, P., Pulkkinen, O., Minussi, R. B., Vihinen-Ranta, M. & Timonen, J., 12 Apr 2016, In : Physical Review E. 93, 4, 043309.

    Research output: Contribution to journalArticleScientificpeer-review

  7. Published

    Characterizing rate limiting steps in transcription from RNA production times in live cells

    Häkkinen, A. & Ribeiro, A. S., 1 May 2016, In : Bioinformatics. 32, 9, p. 1346-1352 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  8. Published

    Introducing libeemd: a program package for performing the ensemble empirical mode decomposition

    Luukko, P. J. J., Helske, J. & Räsänen, E., 1 Jun 2016, In : Computational Statistics. 31, 2, p. 545-557 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  9. Published

    Search reliability and search efficiency of combined Lévy-Brownian motion: Long relocations mingled with thorough local exploration

    Palyulin, V. V., Chechkin, A. V., Klages, R. & Metzler, R., 8 Sep 2016, In : Journal of Physics A: Mathematical and Theoretical. 49, 39, 394002.

    Research output: Contribution to journalArticleScientificpeer-review

  10. Published

    SamExploreR: Exploring reproducibility and robustness of RNA-seq results based on SAM files

    Stupnikov, A., Tripathi, S., De Matos Simoes, R., McArt, D., Salto-Tellez, M., Glazko, G., Dehmer, M. & Emmert-Streib, F., 1 Nov 2016, In : Bioinformatics. 32, 21, p. 3345-3347 3 p.

    Research output: Contribution to journalArticleScientificpeer-review

  11. 2017
  12. Published

    Nonlinear continuous-wave optical propagation in nematic liquid crystals: Interplay between reorientational and thermal effects

    Alberucci, A., Laudyn, U. A., Piccardi, A., Kwasny, M., Klus, B., Karpierz, M. A. & Assanto, G., 11 Jul 2017, In : Physical Review E. 96, 1, 012703.

    Research output: Contribution to journalArticleScientificpeer-review

  13. 2018
  14. Published

    Comparative analysis of tissue reconstruction algorithms for 3D histology

    Kartasalo, K., Latonen, L., Vihinen, J., Visakorpi, T., Nykter, M. & Ruusuvuori, P., 1 Sep 2018, In : Bioinformatics. 34, 17, p. 3013-3021 9 p.

    Research output: Contribution to journalArticleScientificpeer-review