Tampere University of Technology

TUTCRIS Research Portal

Publications

  1. Published

    Extensive transduction of nonrepetitive DNA mediated by L1 retrotransposition in cancer genomes

    Tubio, J. M. C., Li, Y., Ju, Y. S., Martincorena, I., Cooke, S. L., Tojo, M., Gundem, G., Pipinikas, C. P., Zamora, J., Raine, K., Menzies, A., Roman-Garcia, P., Fullam, A., Gerstung, M., Shlien, A., Tarpey, P. S., Papaemmanuil, E., Knappskog, S., Van Loo, P., Ramakrishna, M., Davies, H. R., Marshall, J., Wedge, D. C., Teague, J. W., Butler, A. P., Nik-Zainal, S., Alexandrov, L., Behjati, S., Yates, L. R., Bolli, N., Mudie, L., Hardy, C., Martin, S., McLaren, S., O'Meara, S., Anderson, E., Maddison, M., Gamble, S., Foster, C., Warren, A. Y., Whitaker, H., Brewer, D., Eeles, R., Cooper, C., Neal, D., Lynch, A. G., Visakorpi, T., Isaacs, W. B., Van't Veer, L., Caldas, C., Desmedt, C., Sotiriou, C., Aparicio, S., Foekens, J. A., Eyfjörd, J. E., Lakhani, S. R., Thomas, G., Myklebost, O., Span, P. N., Børresen-Dale, A. L., Richardson, A. L., Van De Vijver, M., Vincent-Salomon, A., Van Den Eynden, G. G., Flanagan, A. M., Futreal, P. A., Janes, S. M., Bova, G. S., Stratton, M. R., McDermott, U. & Campbell, P. J., 1 Aug 2014, In : Science. 345, 6196, 1251343.

    Research output: Contribution to journalReview ArticleScientificpeer-review

  2. Published

    Facile strain analysis of largely bending films by a surface-labelled grating method

    Akamatsu, N., Tashiro, W., Saito, K., Mamiya, J. I., Kinoshita, M., Ikeda, T., Takeya, J., Fujikawa, S., Priimagi, A. & Shishido, A., 20 Jun 2014, In : Scientific Reports. 4, 5377.

    Research output: Contribution to journalArticleScientificpeer-review

  3. Published

    First passage time distribution in heterogeneity controlled kinetics: Going beyond the mean first passage time

    Godec, A. & Metzler, R., 8 Feb 2016, In : Scientific Reports. 6, 20349.

    Research output: Contribution to journalArticleScientificpeer-review

  4. Published

    Gaussian Light Model in Brightfield Optical Projection Tomography

    Koskela, O., Montonen, T., Belay, B., Figueiras, E., Pursiainen, S. & Hyttinen, J., 26 Sep 2019, In : Scientific Reports. 9, 1

    Research output: Contribution to journalArticleScientificpeer-review

  5. Published

    Genetic similarity of biological samples to counter bio-hacking of DNA-sequencing functionality

    Islam, M. S., Ivanov, S., Robson, E., Dooley-Cullinane, T., Coffey, L., Doolin, K. & Balasubramaniam, S., 1 Dec 2019, In : Scientific Reports. 9, 1, 8684.

    Research output: Contribution to journalArticleScientificpeer-review

  6. Published

    Genome-wide modeling of transcription kinetics reveals patterns of RNA production delays

    Honkela, A., Peltonen, J., Topa, H., Charapitsa, I., Matarese, F., Grote, K., Stunnenberg, H. G., Reid, G., Lawrence, N. D. & Rattray, M., 20 Oct 2015, In : Proceedings of the National Academy of Sciences of the United States of America. 112, 42, p. 13115-13120 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  7. Published

    Genomically amplified Akt3 activates DNA repair pathway and promotes glioma progression

    Turner, K. M., Sun, Y., Ji, P., Granberg, K. J., Bernard, B., Hu, L., Cogdell, D. E., Zhou, X., Yli-Harja, O., Nykter, M., Shmulevich, I., Yung, W. K. A., Fuller, G. N. & Zhang, W., 17 Mar 2015, In : Proceedings of the National Academy of Sciences of the United States of America. 112, 11, p. 3421-3426 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  8. Published

    Glucosylceramide modifies the LPS-induced inflammatory response in macrophages and the orientation of the LPS/TLR4 complex in silico

    Mobarak, E., Håversen, L., Manna, M., Rutberg, M., Levin, M., Perkins, R., Rog, T., Vattulainen, I. & Borén, J., 1 Dec 2018, In : Scientific Reports. 8, 1, 13600.

    Research output: Contribution to journalArticleScientificpeer-review

  9. Published

    Highly ductile amorphous oxide at room temperature and high strain rate

    Frankberg, E. J., Kalikka, J., Ferré, F. G., Joly-Pottuz, L., Salminen, T., Hintikka, J., Hokka, M., Koneti, S., Douillard, T., Le Saint, B., Kreiml, P., Cordill, M. J., Epicier, T., Stauffer, D., Vanazzi, M., Roiban, L., Akola, J., Fonzo, F. D., Levänen, E. & Masenelli-Varlot, K., 15 Nov 2019, In : Science. 366, 6467, p. 864-869 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  10. Published

    Highly-Sensitive Refractive Index Sensing by Near-infrared Metatronic Nanocircuits

    Rashed, A. R., Gudulluoglu, B., Yun, H. W., Habib, M., Boyaci, I. H., Hong, S. H., Ozbay, E. & Caglayan, H., 1 Dec 2018, In : Scientific Reports. 8, 1, 11457.

    Research output: Contribution to journalArticleScientificpeer-review

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