Tampere University of Technology

TUTCRIS Research Portal

Publications

  1. Article › Scientific › Peer-reviewed
  2. Published

    Dual and single polarized sar image classification using compact convolutional neural networks

    Ahishali, M., Kiranyaz, S., Ince, T. & Gabbouj, M., 1 Jun 2019, In : Remote Sensing. 11, 11, 1340.

    Research output: Contribution to journalArticleScientificpeer-review

  3. Published

    Dual-Mode Congestion Control Mechanism for Video Services

    Vihervaara, J. & Loula, P., Dec 2015, In : Journal of Media and Mass Communication. 1, 2, p. 50-56

    Research output: Contribution to journalArticleScientificpeer-review

  4. Published

    Dynamic Activities for Managing an IS-Enabled Organizational Change

    Salmimaa, T., Hekkala, R. & Pekkola, S., 1 Apr 2018, In : Business and Information Systems Engineering. 60, 2, p. 133-149 17 p.

    Research output: Contribution to journalArticleScientificpeer-review

  5. Published

    Dynamic agent-based model of hand-preference behavior patterns in the mouse

    S. Ribeiro, A., Lloyd-Price, J., Eales, B. A. & Biddle, F. G., 2010, In : Adaptive Behavior. 18, 2, p. 116-131

    Research output: Contribution to journalArticleScientificpeer-review

  6. Published

    Dynamical effects of transcriptional pause-prone sites

    S. Ribeiro, A., Häkkinen, A., Healy, S. & Yli-Harja, O., 2010, In : Computational Biology and Chemistry. 34, 3, p. 143-148

    Research output: Contribution to journalArticleScientificpeer-review

  7. Published

    Dynamic analysis of MAPK signaling using a high-throughput microfluidic single-cell imaging platform

    Taylor, R. J., Falconnet, D., Niemistö, A., Ramsey, S. A., Prinz, S., Shmulevich, I., Galitski, T. & Hansen, C. L., 2009, In : Proceedings of the National Academy of Sciences of the United States of America. 106, 10, p. 3758-3763

    Research output: Contribution to journalArticleScientificpeer-review

  8. Published

    Dynamic and scalable audio classification by collective network of binary classifiers framework: An evolutionary approach

    Kiranyaz, S., Mäkinen, T. & Gabbouj, M., 2012, In : Neural Networks. 34, p. 80-95

    Research output: Contribution to journalArticleScientificpeer-review

  9. Published

    Dynamic data clustering using stochastic approximation driven multi-dimensionla particle swarm optimization

    Kiranyaz, S., Ince, T. & Gabbouj, M., 2010, In : Lecture Notes in Computer Science. 6024, p. 336-343

    Research output: Contribution to journalArticleScientificpeer-review

  10. Published

    Dynamic, data-driven processing of multispectral video streams

    Li, H., Sudusinghe, K., Liu, Y., Yoon, J., Der Schaar, M. V., Blasch, E. & Bhattacharyya, S. S., 1 Jul 2017, In : IEEE Aerospace and Electronic Systems Magazine. 32, 7, p. 50-57 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  11. Published

    Dynamic Queries with Relevance Feedback for Content Based Image Retrieval

    Birinci, M., Guldogan, E. & Gabbouj, M., 2011, In : Lecture Notes in Computer Science. 6761, p. 547-554

    Research output: Contribution to journalArticleScientificpeer-review

  12. Published

    Dynamics and evolution of stochastic bistable gene networks with sensisng in fluctuating environments

    S. Ribeiro, A., 2008, In : Physical Review E. 78, 6, 061902, p. 9 p

    Research output: Contribution to journalArticleScientificpeer-review

  13. Published

    Dynamics of genetic toggle switch at the nucleotide and codon levels

    Potapov, I., Lloyd-Price, J., Yli-Harja, O. & Ribeiro, A. S., 2011, In : Physical Review E. 84, 3, p. 1-9 9 p., 031903.

    Research output: Contribution to journalArticleScientificpeer-review

  14. Published

    Dynamics of small genetic circuits subject to stochastic partitioning in cell division

    Lloyd-Price, J., Tran, H. & Ribeiro, A. S., 2014, In : Journal of Theoretical Biology. 356, p. 11-19 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  15. Published

    Dynamics of transcription driven by the tetA promoter, one event at a time, in live Escherichia coli cells

    Muthukrishnan, A., Kandhavelu, M., Lloyd-Price, J., Kudasov, F., Chowdhury, S., Yli-Harja, O. & Ribeiro, A. S., 2012, In : Nucleic Acids Research. 40, 17, p. 8472-8483

    Research output: Contribution to journalArticleScientificpeer-review

  16. Published

    Dynamics of Transcription of Closely Spaced Promoters in Escherichia coli, One Event at a Time

    Martins, L., Mäkelä, J., Häkkinen, A., Kandhavelu, M., Yli-Harja, O., Fonseca, J. & Ribeiro, A., 2012, In : Journal of Theoretical Biology. 301, p. 83-94

    Research output: Contribution to journalArticleScientificpeer-review

  17. Published

    Dynamic speckle analysis with smoothed intensity-based activity maps

    Stoykova, E., Berberova, N., Kim, Y., Nazarova, D., Ivanov, B., Gotchev, A., Hong, J. & Kang, H., 1 Jun 2017, In : Optics and Lasers in Engineering. 93, p. 55-65 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  18. Published

    Early analysis of resource consumption patterns in mobile applications

    Berrocal, J., Garcia-Alonso, J., Vicente-Chicote, C., Hernández, J., Mikkonen, T., Canal, C. & Murillo, J. M., 2017, In : Pervasive and Mobile Computing. 35, p. 32–50

    Research output: Contribution to journalArticleScientificpeer-review

  19. Early effects of imatinib mesylate on the expression of insulin-like growth factor binding proetein 3 and psitrom emission tomography in patients with gastrointestinal stromal tumor

    Trent, J. C., Ramdas, L., Dupart, J. J., Hunt, K., Oyedeji, C., Taylor, E. E., Hu, L., Chen, L. L., Benjamin, R. S., Pollock, R. & Zhang, W., 2006, In : Cancer. 107, 8, p. 1898-1908

    Research output: Contribution to journalArticleScientificpeer-review

  20. Published

    Echovirus 1 internalization negatively regulates epidermal growth factor receptor downregulation

    Huttunen, M., Turkki, P., Mäki, A., Paavolainen, L., Ruusuvuori, P. & Marjomäki, V., 2017, In : Cellular Microbiology. 19, 3, e12671.

    Research output: Contribution to journalArticleScientificpeer-review

  21. Published

    Effective Connectivity Analysis in Brain Networks: a GPU-Accelerated Implementation of the Cox Method

    Andalibi, V., Christophe, F., Laukkarinen, T. & Mikkonen, T., 24 Aug 2016, In : IEEE Journal of Selected Topics in Signal Processing. 10, 7, p. 1226-1237 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  22. Published

    Effectiveness of a web-based Acceptance and Commitment Therapy intervention for wellbeing of parents whose children have chronic conditions: A randomized controlled trial

    Sairanen, E., Lappalainen, R., Lappalainen, P., Kaipainen, K., Carlstedt, F., Anclair, M. & Hiltunen, A., Jul 2019, In : Journal of Contextual Behavioral Science. 13, p. 94-102 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  23. Published

    Effects of Codon Sequence on the Dynamics of Genetic Networks

    Potapov, I., Mäkelä, J., Yli-Harja, O. & Ribeiro, A. S., 2012, In : Journal of Theoretical Biology. 315, p. 17-25

    Research output: Contribution to journalArticleScientificpeer-review

  24. Effects of coupling strength and space on the dynamics of coupled toggle switches in stochastic gene networks with multiple-delayed reactions

    S. Ribeiro, A., 2007, In : Physical Review E. 75, 6, 061903.

    Research output: Contribution to journalArticleScientificpeer-review

  25. Published

    Effects of Gene Length on the Dynamics of Gene Expression

    Ribeiro, A. S., Häkkinen, A. & Lloyd-Price, J., 2012, In : Computational Biology and Chemistry. 41, p. 1-9 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  26. Published

    Effects of latanoprost in iris bioidentification

    Lamminen, H., Voipio, V., Manninen, T. & Huttunen, H., 2009, In : Acta Ophthalmologica. 87, 5, p. 529-531

    Research output: Contribution to journalArticleScientificpeer-review

  27. Effects of lattice structure in the dynamics of coupled elements

    S. Ribeiro, A. & Lind, P. G., 2005, In : Physica Scripta. T118, p. 165-167

    Research output: Contribution to journalArticleScientificpeer-review

  28. Published

    Effects of Mg2+ on in vivo transcriptional dynamics of the lar promoter

    Kandhavelu, M., Lihavainen, E., Muthukrishnan, A., Yli-Harja, O. & Ribeiro, A., 2012, In : Biosystems. 107, 3, p. 129-134

    Research output: Contribution to journalArticleScientificpeer-review

  29. Published

    Effects of microarray noise on inference efficiency of a stochastic model of gene networks

    Charlebois, D. A., S. Ribeiro, A., Lehmussola, A., Lloyd-Price, J., Yli-Harja, O. & Kauffman, S. A., 2007, In : WSEAS Transactions on Biology and Biomedicine. 4, 2, p. 15-21

    Research output: Contribution to journalArticleScientificpeer-review

  30. Published

    Effects of multimerization on the temporal variability of protein complex abundance

    Häkkinen, A., Tran, H., Yli-Harja, O., Ingalls, B. & Ribeiro, A. S., 2013, In : BMC Systems Biology. 7, Suppl 1, 13 p., S3.

    Research output: Contribution to journalArticleScientificpeer-review

  31. Published

    Effects of Rate-Limiting Steps in Transcription Initiation on Genetic Filter Motifs

    Häkkinen, A., Tran, H., Yli-Harja, O. & Ribeiro, A. S., 2013, In : PLoS ONE. 8, 8, p. 1-9 9 p., e70439.

    Research output: Contribution to journalArticleScientificpeer-review

  32. Published

    Effects of spatial smoothing on inter-subject correlation based analysis of FMRI

    Pajula, J. & Tohka, J., 2014, In : Magnetic Resonance Imaging. 32, 9, p. 1114-1124 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  33. Published

    Effects of subsampling on characteristics of RNA‑seq data from triple‑negative breast cancer patients

    Stupnikov, A., Glazko, G. V. & Emmert-Streib, F., 8 Sep 2015, In : Chinese Journal of Cancer. 34, 10

    Research output: Contribution to journalArticleScientificpeer-review

  34. Published

    Effects of temperature on the dynamics of the LacI-TetR-CI repressilator

    Chandraseelan, J. G., Oliveira, S. M. D., Häkkinen, A., Tran, H., Potapov, I., Sala, A., Kandhavelu, M. & Ribeiro, A. S., 2013, In : Molecular Biosystems. 9, 12, p. 3117-3123 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  35. Published

    Effects of the promoter open complex formation on gene expression dynamics

    S. Ribeiro, A., Häkkinen, A., Mannerström, H., Lloyd-Price, J. & Yli-Harja, O., 2010, In : Physical Review E. 81, 1, 0119129, p. 1-5 5 p.

    Research output: Contribution to journalArticleScientificpeer-review

  36. Published

    Effects of transcriptional pausing on gene expression dynamics

    Rajala, T., Häkkinen, A., Healy, S., Yli-Harja, O. & S. Ribeiro, A., 2010, In : PLoS Computational Biology. 6, 3, p. 1-12 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  37. Published

    Effects of Transmitters and Amyloid-Beta Peptide on Calcium Signals in Rat Cortical Astrocytes: Fura-2AM Measurements and Stochastic Model Simulations

    Toivari, E., Manninen, T., Nahata, A. K., Jalonen, T. O. & Linne, M-L., 2011, In : PLoS ONE. 6, 3, p. 1-9 9 p., e17914.

    Research output: Contribution to journalArticleScientificpeer-review

  38. Published

    Effects of σ factor competition are promoter initiation kinetics dependent

    Kandavalli, V. K., Tran, H. & Ribeiro, A. S., 1 Oct 2016, In : Biochimica et Biophysica Acta: Gene Regulatory Mechanisms. 1859, 10, p. 1281-1288 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  39. Published

    Efficiency of texture image enhancement by DCT-based filtering

    Rubel, A., Lukin, V., Uss, M., Vozel, B., Pogrebnyak, O. & Egiazarian, K., 2015, In : Neurocomputing. 175, p. 948-965

    Research output: Contribution to journalArticleScientificpeer-review

  40. Published

    Efficiency of texture image filtering and its prediction

    Rubel, O., Lukin, V., Abramov, S., Vozel, B., Egiazarian, K. & Pogrebnyak, O., 2016, In : Signal, Image and Video Processing. 10, 8, p. 1543–1550 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  41. Published

    Efficient adaptive inference for deep convolutional neural networks using hierarchical early exits

    Passalis, N., Raitoharju, J., Tefas, A. & Gabbouj, M., Sep 2020, In : Pattern Recognition. 105, 107346.

    Research output: Contribution to journalArticleScientificpeer-review

  42. Published

    Efficient FPGA-Mapping of Pipeline SDF FFT Cores

    Ingemarsson, C., Källström, P., Qureshi, F. & Gustafsson, O., 2017, In : IEEE Transactions on Very Large Scale Integration (VLSI) Systems.

    Research output: Contribution to journalArticleScientificpeer-review

  43. Published

    Electromagnetic 3D subsurface imaging with source sparsity for a synthetic object

    Pursiainen, S. & Kaasalainen, M., 4 Nov 2015, In : Inverse Problems. 31, 12, 17 p., 125004.

    Research output: Contribution to journalArticleScientificpeer-review

  44. Published

    Elements explaining learning clinical reasoning by playing simulation game

    Koivisto, J-M., Haavisto, E., Niemi, H., Katajisto, J. & Multisilta, J., Dec 2016, In : International Journal of Serious Games. 3, 4

    Research output: Contribution to journalArticleScientificpeer-review

  45. Elevated expressions of p21 (WAFI/Cip1) in hormonally active pituitary adenomas

    Neto, A. G., McCutcheon, I. E., Vang, R., Spencer, M. L., Zhang, W. & Fuller, G. N., 2005, In : Annals of Diagnostic Pathology. 9, p. 6-10

    Research output: Contribution to journalArticleScientificpeer-review

  46. Published

    Emmerdale netissä: Ohjelmakohtaisten sivustojen käyttötarkoitukset osana katselukokemusta

    Tuomi, P., 2014, In : Tekniikan Waiheita: Teknik I Tiden. 4, 32, p. 23-31 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  47. Published

    Emotional Reactions to Point-Light Display Animations

    Venesvirta, H., Surakka, V., Gizatdinova, Y., Lylykangas, J., Špakov, O., Verho, J., Vetek, A. & Lekkala, J., 16 Jun 2016, In : Interacting with Computers. 28, 4, p. 521-531 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  48. Published

    Employing Knowledge on Causal Relationship to Assist Multidisciplinary Design Optimization

    Wu, D., Coatanea, E. & Wang, G. G., Apr 2019, In : Journal of Mechanical Design, Transactions of the ASME. 141, 4, 041402.

    Research output: Contribution to journalArticleScientificpeer-review

  49. Published

    Engaging in knowledge exchange: The instrumental psychological ownership in open innovation communities

    Pirkkalainen, H., Pawlowski, J. M., Bick, M. & Tannhäuser, A-C., 2018, In : International Journal of Information Management. 38, 1, p. 277-287

    Research output: Contribution to journalArticleScientificpeer-review

  50. Published

    Enhancing the usability of low-cost eye trackers for rehabilitation applications

    Gavas, R. D., Roy, S., Chatterjee, D., Tripathy, S. R., Chakravarty, K. & Sinha, A., 1 Jun 2018, In : PLoS ONE. 13, 6, e0196348.

    Research output: Contribution to journalArticleScientificpeer-review

  51. Published

    Enriching shared experience by collective heart rate

    Perttula, A., Tuomi, P., Kiili, K., Suominen, M., Koivisto, A. & Multisilta, J., 2013, In : International Journal of Social and Humanistic Computing. 2, 1/2, p. 31-50 20 p.

    Research output: Contribution to journalArticleScientificpeer-review

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