Tampere University of Technology

TUTCRIS Research Portal

Publications

  1. Article › Scientific › Peer-reviewed
  2. Published

    Tumor-specific usage of alternative transcription start sites in colorectal cancer identified by genome-wide exon array analysis

    Thorsen, K., Schepeler, T., Öster, B., Rasmussen, M. H., Vang, S., Wang, K., Hansen, K. Q., Lamy, P., Pedersen, J. S., Eller, A., Mansilla, F., Laurila, K., Wiuf, C., Laurberg, S., Dyrskjöt, L., Örntoft, T. F. & Andersen, C. L., 2011, In : BMC Genomics. 12, 505.

    Research output: Contribution to journalArticleScientificpeer-review

  3. E-pub ahead of print

    Tunable VVC Frame Partitioning based on Lightweight Machine Learning

    Amestoy, T., Mercat, A., Hamidouche, W., Menard, D. & Bergeron, C., 6 Sep 2019, In : IEEE Transactions on Image Processing.

    Research output: Contribution to journalArticleScientificpeer-review

  4. Published

    Tuning cell differentiation patterns and single cell dynamics by regulating proteins' functionalities in a toggle switch

    Dai, X., Healy, S., Yli-Harja, O. & S. Ribeiro, A., 2009, In : Journal of Theoretical Biology. 261, 3, p. 441-448

    Research output: Contribution to journalArticleScientificpeer-review

  5. Published

    Turning wingbeat sounds into spectrum images for acoustic insect classification

    Zhang, C., Wang, P., Guo, H., Fan, G., Chen, K. & Kämäräinen, J-K., 2017, In : Electronics Letters. 53, 25, p. 1674-1676 3 p.

    Research output: Contribution to journalArticleScientificpeer-review

  6. Published

    Twist predicts poor outcome of patients with astrocytic glioma

    Nordfors, K., Haapasalo, J., Mäkelä, K., Granberg, K. J., Nykter, M., Korja, M., Paavonen, T., Haapasalo, H. & Soini, Y., 2015, In : Journal of Clinical Pathology. 68, 11, p. 905-912 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  7. Published

    Two mature products of MIR-491 coordinate to suppress key cancer hallmarks in glioblastoma

    Li, X., Liu, Y., Granberg, K. J., Wang, Q., Moore, L. M., Ji, P., Gumin, J., Sulman, E. P., Calin, G. A., Haapasalo, H., Nykter, M., Shmulevich, I., Fuller, G. N., Lang, F. F. & Zhang, W., 2015, In : Oncogene. 34, 13, 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  8. Published

    Työtapaturmaisten olka- ja polvivammojen hoitotoimenpiteet ja -kustannukset sekä hoidon ja sairauslomien kesto vakuutusyhtiön rekisteriaineistoon perustuen

    Pietilä, J., Helander, E. & Tolonen, J., 8 Mar 2018, In : Finnish Journal of eHealth and eWelfare. 10, 1, p. 113-132

    Research output: Contribution to journalArticleScientificpeer-review

  9. Published

    Unbiased Injection of Signal-Dependent Noise in Variance-Stabilized Range

    Borges, L., Vieira, M. & Foi, A., 2016, In : IEEE Signal Processing Letters. 23, 10, p. 1494-1498

    Research output: Contribution to journalArticleScientificpeer-review

  10. Published

    Understanding business ecosystem dynamics: A data-driven approach

    Basole, R. C., Russell, M. G., Huhtamäki, J., Rubens, N., Still, K. & Park, H., 1 May 2015, In : ACM Transactions on Management Information Systems. 6, 2, 6.

    Research output: Contribution to journalArticleScientificpeer-review

  11. Published

    Understanding decision-making in recruitment: Opportunities and challenges for information technology

    Koivunen, S., Olsson, T., Olshannikova, E. & Lindberg, A., 1 Dec 2019, In : Proceedings of the ACM on Human-Computer Interaction. 3, GROUP, 22 p., 242.

    Research output: Contribution to journalArticleScientificpeer-review

  12. Published

    Understanding Statistical Hypothesis Testing: The Logic of Statistical Inference

    Emmert-Streib, F. & Dehmer, M., 12 Aug 2019, In : Machine Learning and Knowledge Extraction. 1, 3, p. 945-962

    Research output: Contribution to journalArticleScientificpeer-review

  13. Published

    Understanding the most influential user experiences in successful and unsuccessful technology adoptions

    Partala, T. & Saari, T., 25 Jul 2015, In : Computers in Human Behavior. 53, p. 381-395 15 p.

    Research output: Contribution to journalArticleScientificpeer-review

  14. Published

    Understanding the most satisfying and unsatisfying user experiences: Emotions, psychological needs, and context

    Partala, T. & Kallinen, A., 2012, In : Interacting with Computers. 24, 1, p. 25-34

    Research output: Contribution to journalArticleScientificpeer-review

  15. Published

    Unidirectional P-Body Transport during the Yeast Cell Cycle

    Garmendia-Torres, C., Skupin, A., Michael, S. A., Ruusuvuori, P., Kuwada, N. J., Falconnet, D., Cary, G. A., Hansen, C., Wiggins, P. A. & Dudley, A. M., 2014, In : PLoS ONE. 9, 6, p. 1-9 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  16. Published

    Uniform Motion Blur in Poissonian Noise: Blur/Noise Tradeoff

    Boracchi, G. & Foi, A., 2011, In : IEEE Transactions on Image Processing. 20, 2, p. 592-598

    Research output: Contribution to journalArticleScientificpeer-review

  17. Published

    Unsupervised object discovery via self-organisation

    Kinnunen, T., Kämäräinen, J-K., Lensu, L. & Kälviäinen, H., 2012, In : Pattern Recognition Letters. 33, p. 2102-2112

    Research output: Contribution to journalArticleScientificpeer-review

  18. Published

    Urban 3D segmentation and modelling from street view images and LiDAR point clouds

    Babahajiani, P., Fan, L., Kämäräinen, J-K. & Gabbouj, M., 2017, In : Machine Vision and Applications. 28, 7, p. 679–694 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  19. Urinary thrombomodulin levels were significantly higher following occupational exposure to chemicals, in the presence of dipstick protein, but not in the presence of dipstick blood

    Ruddock, M. W., De Matos Simoes, R., O'Rourke, D., Duggan, B., Stevenson, M., O'Kane, H. F., Curry, D., Abogunrin, F., Emmert-Streib, F., Reid, C. N., Maxwell, P., Arthur, K., Mallon, M., Carson, G., Kennedy, G. & Williamson, K. E., 2016, In : Biology and Medicine. 8, 1, 1000260.

    Research output: Contribution to journalArticleScientificpeer-review

  20. Published

    Urothelial cancer gene regulatory networks inferred from large-scale RNAseq, Bead and Oligo gene expression data

    Matos Simoes, R. D., Dalleau, S., Williamson, K. E. & Emmert-Streib, F., 14 May 2015, In : BMC Systems Biology. 9, 21.

    Research output: Contribution to journalArticleScientificpeer-review

  21. Published

    User Evaluation of Mobile Augmented Reality Scenarios

    Olsson, T., Kärkkäinen, T., Lagerstam, E. & Ventä-Olkkonen, L., 2012, In : Journal of Ambient Intelligence and Smart Environments. 4, 1, p. 29-47

    Research output: Contribution to journalArticleScientificpeer-review

  22. Published

    User experience evaluation - Which method to choose?

    Roto, V., Vermeeren, A., Väänänen-Vainio-Mattila, K. & Law, E., 2011, In : Lecture Notes in Computer Science. 6949, p. 714-715

    Research output: Contribution to journalArticleScientificpeer-review

  23. Published

    Uses and Gratifications of Pokémon Go: Why do People Play Mobile Location-Based Augmented Reality Games?

    Hamari, J., Malik, A., Koski, J. & Johri, A., 2019, In : International Journal of Human-Computer Interaction. 35, 9

    Research output: Contribution to journalArticleScientificpeer-review

  24. Published

    Using Deep Learning for price prediction by exploiting stationary limit order book features

    Tsantekidis, A., Passalis, N., Tefas, A., Kanniainen, J., Gabbouj, M. & Iosifidis, A., 1 Aug 2020, In : Applied Soft Computing Journal. 93, 106401.

    Research output: Contribution to journalArticleScientificpeer-review

  25. Published

    Using domain knowledge to boost software architecture evaluation

    Eloranta, V-P. & Koskimies, K., 2010, In : Lecture Notes in Computer Science. 6285, p. 319-326

    Research output: Contribution to journalArticleScientificpeer-review

  26. Published

    Using enterprise architecture artefacts in an organisation

    Niemi, E. & Pekkola, S., 2017, In : Enterprise Information Systems. 11, 3, p. 313-338

    Research output: Contribution to journalArticleScientificpeer-review

  27. Published

    Using GUHA Data Mining Method in Analyzing Road Traffic Accidents Occurred in the Years 2004–2008 in Finland

    Turunen, E., 27 Nov 2017, In : Data Science and Engineering. 2, 3, p. 224-231 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  28. Published

    Using Mobile Technology to Bring Families Together: The Design of a Family History Concept to Motivate Face-to-Face Communication

    Jarusriboonchai, P. & Väänänen-Vainio-Mattila, K., 2012, In : International Journal of Mobile Human Computer Interaction. 4, 2, p. 1-17 17 p.

    Research output: Contribution to journalArticleScientificpeer-review

  29. Published

    Using multi-step proposal distribution for improved MCMC convergence in Bayesian network structure learning

    Larjo, A. & Lähdesmäki, H., 27 Dec 2015, In : Eurasip Journal on Bioinformatics and Systems Biology. 2015, 1, 6.

    Research output: Contribution to journalArticleScientificpeer-review

  30. Published

    Using shRNA experiments to validate gene regulatory networks

    Olsen, C., Fleming, K., Prendergast, N., Rubio, R., Emmert-Streib, F., Bontempi, G., Quackenbush, J. & Haibe-Kains, B., 1 Jun 2015, In : Genomics Data. 4, p. 123-126 4 p.

    Research output: Contribution to journalArticleScientificpeer-review

  31. Using social media to leverage and develop dynamic capabilities for innovation

    Mention, A-L., Barlatier, P. J. & Josserand, E., Jul 2019, In : Technological Forecasting and Social Change. 144, p. 242-250 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  32. Published

    Using video games to combine learning and assessment in mathematics education

    Kiili, K., Devlin, K., Perttula, A., Tuomi, S. & Lindstedt, A., 2015, In : International Journal of Serious Games. 2, 4

    Research output: Contribution to journalArticleScientificpeer-review

  33. Published

    Utilization and Impacts of GPS Tracking in Healthcare: A Research Study for Elderly Care

    Munir, W. M., Perälä, S. & Mäkelä, K., 2012, In : International Journal of Computer Applications. 45, 11, p. 35-37

    Research output: Contribution to journalArticleScientificpeer-review

  34. Published

    UX Curve: A Method for Evaluating Long-Term User Experience

    Kujala, S., Roto, V., Väänänen-Vainio-Mattila, K., Karapanos, E. & Sinnelä, A., 2011, In : Interacting with Computers. 23, 5, p. 473-483

    Research output: Contribution to journalArticleScientificpeer-review

  35. Published

    Validating effectiveness of safety requirements' compliance evaluation in process assessments

    Varkoi, T., Mäkinen, T., Cameron, F. & Nevalainen, R., 2020, In : Journal of Software: Evolution and Process. 32, 3, 16 p., e2177.

    Research output: Contribution to journalArticleScientificpeer-review

  36. Published

    Variability of the distribution of differentiation pathway choices regulated by a multipotent delayed stochastic switch

    S. Ribeiro, A., Dai, X. & Yli-Harja, O., 2009, In : Journal of Theoretical Biology. 260, 1, p. 66-76 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  37. Published

    Variable Length Instruction Compression on Transport Triggered Architectures

    Viitanen, T., Helkala, J., Kultala, H., Jääskeläinen, P., Takala, J., Zetterman, T. & Berg, H., Dec 2018, In : International Journal of Parallel Programming. 46, 6, p. 1283-1303 21 p.

    Research output: Contribution to journalArticleScientificpeer-review

  38. Published

    Variable Selection by sNML Criterion in Logistic Regression with an Application to a Risk-Adjustment Model for Hip Fracture Mortality

    Liski, A., Tabus, I., Sund, R. & Häkkinen, U., 2012, In : Journal of Data Science. 10, 2, p. 321-343

    Research output: Contribution to journalArticleScientificpeer-review

  39. Published

    Variance-preserving Deep Metric Learning for Content-based Image Retrieval

    Passalis, N., Iosifidis, A., Gabbouj, M. & Tefas, A., 2020, In : Pattern Recognition Letters. 131, p. 8-14 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  40. Published

    Variance Stabilization for Noisy+Estimate Combination in Iterative Poisson Denoising

    Azzari, L. & Foi, A., 1 Aug 2016, In : IEEE Signal Processing Letters. 23, 8, p. 1086-1090 5 p.

    Research output: Contribution to journalArticleScientificpeer-review

  41. Vasculogenic mimicry is associated with high tumor grade, invasion and metastasis, and shor survival in patients with hepatocellular carcinoma

    Sun, B. C., Zhang, S. W., Zhang, D. F., Du, J., Guo, H., Hao, X. L., Zhang, W. & Hao, X. S., 2006, In : Oncology Report. 16, 4, p. 693-698

    Research output: Contribution to journalArticleScientificpeer-review

  42. E-pub ahead of print

    Vehicle Attribute Recognition by Appearance: Computer Vision Methods for Vehicle Type, Make and Model Classification

    Ni, X. & Huttunen, H., 2020, In : Journal of Signal Processing Systems.

    Research output: Contribution to journalArticleScientificpeer-review

  43. Published

    Vehicle type detection and passenger satisfaction analysis using smartphone sensors and digital surveys

    Perttula, A., Nguyen, N., Collin, J. & Jokinen, J-P., 1 Oct 2019, In : IET Intelligent Transport Systems. 13, 10, p. 1499-1506 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  44. Published

    VERTIGO: Find, enjoy and share media trails across physical and social contexts

    Galli, L., Guarneri, R. & Huhtamäki, J., 2010, In : Lecture Notes of the Institute for Computer Sciences, Social Informatics and Telecommunications Engineering. 21, p. 64-73

    Research output: Contribution to journalArticleScientificpeer-review

  45. Published

    Vibrotactile Stimulation as an Instructor for Mimicry-Based Physical Exercise

    Lylykangas, J., Heikkinen, J., Surakka, V., Raisamo, R., Myllymaa, K. & Laitinen, A., 2015, In : Advances in Human Computer Interaction. 953794.

    Research output: Contribution to journalArticleScientificpeer-review

  46. E-pub ahead of print

    Video coding of dynamic 3D point cloud data

    Schwarz, S., Sheikhipour, N., Fakour Sevom, V. & Hannuksela, M. M., 2019, In : APSIPA Transactions on Signal and Information Processing. 12 p., e31.

    Research output: Contribution to journalArticleScientificpeer-review

  47. Published

    Video Coding Using Spatially Varying Transform

    Zhang, C., Kemal, U., Lainema, J., Hallapuro, A. & Gabbouj, M., 2011, In : IEEE Transactions on Circuits and Systems for Video Technology. 21, 2, p. 127-140

    Research output: Contribution to journalArticleScientificpeer-review

  48. Published

    Video Denoising, Deblocking, and Enhancement Through Separable 4-D Nonlocal Spatiotemporal Transforms

    Maggioni, M., Boracchi, G., Foi, A. & Egiazarian, K., 2012, In : IEEE Transactions on Image Processing. 21, 9, p. 3952-3966

    Research output: Contribution to journalArticleScientificpeer-review

  49. Published

    View upsampling optimization for mixed resolution 3D video coding

    Joachimiak, M., Hannuksela, M. M. & Gabbouj, M., 2015, In : Multidimensional Systems and Signal Processing.

    Research output: Contribution to journalArticleScientificpeer-review

  50. Published

    Visual decision support for business ecosystem analysis

    Basole, R. C., Huhtamäki, J., Still, K. & Russell, M. G., 15 Dec 2016, In : Expert Systems with Applications. 65, p. 271-282 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  51. Published

    Visualizations of User Data in a Social Media Enhanced Web-based Environment in Higher Education

    Silius, K., Tervakari, A-M. & Kailanto, M., 2013, In : International Journal of Emerging Technologies in Learning. 8, 2, p. 13-19 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

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