Tampere University of Technology

TUTCRIS Research Portal

Publications

  1. Article › Scientific › Peer-reviewed
  2. Published

    SamExploreR: Exploring reproducibility and robustness of RNA-seq results based on SAM files

    Stupnikov, A., Tripathi, S., De Matos Simoes, R., McArt, D., Salto-Tellez, M., Glazko, G., Dehmer, M. & Emmert-Streib, F., 1 Nov 2016, In : Bioinformatics. 32, 21, p. 3345-3347 3 p.

    Research output: Contribution to journalArticleScientificpeer-review

  3. Published

    Satisfiability of modal inclusion logic: Lax and strict semantics

    Hella, L., Kuusisto, A., Meier, A. & Vollmer, H., 1 Oct 2019, In : ACM TRANSACTIONS ON COMPUTATIONAL LOGIC. 21, 1, 7.

    Research output: Contribution to journalArticleScientificpeer-review

  4. Published

    SCIP: a single-cell image processor toolbox

    Martins, L., Neeli-Venkata, R., Oliveira, S. M. D., Häkkinen, A., Ribeiro, A. S. & Fonseca, J. M., 15 Dec 2018, In : Bioinformatics. 34, 24, p. 4318-4320 3 p.

    Research output: Contribution to journalArticleScientificpeer-review

  5. Published

    Sound Event Detection in the DCASE 2017 Challenge

    Mesaros, A., Diment, A., Elizalde, B., Heittola, T., Vincent, E., Raj, B. & Virtanen, T., 1 Jun 2019, In : IEEE/ACM Transactions on Audio Speech and Language Processing. 27, 6, p. 992-1006 15 p.

    Research output: Contribution to journalArticleScientificpeer-review

  6. Structural similarity of directed universal hierarchical graphs: A low computational complexity approach

    Dehmer, M. & Emmert-Streib, F., 1 Dec 2007, In : Applied Mathematics and Computation. 194, 1, p. 7-20 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  7. Published

    The watching system as a generalization of identifying code

    Ghorbani, M., Dehmer, M., Maimani, H., Maddah, S., Roozbayani, M. & Emmert-Streib, F., 2020, In : Applied Mathematics and Computation. 380, 7 p., 125302.

    Research output: Contribution to journalArticleScientificpeer-review

  8. Topological mappings between graphs, trees and generalized trees

    Emmert-Streib, F. & Dehmer, M., 15 Mar 2007, In : Applied Mathematics and Computation. 186, 2, p. 1326-1333 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  9. Unite and conquer: Univariate and multivariate approaches for finding differentially expressed gene sets

    Glazko, G. V. & Emmert-Streib, F., Sep 2009, In : Bioinformatics. 25, 18, p. 2348-2354 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  10. Published

    Universal construction mechanism for networks from one-dimensional symbol sequences

    Emmert-Streib, F., 15 Oct 2012, In : Applied Mathematics and Computation. 219, 3, p. 1020-1030 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  11. Published

    Van der Waals interactions are critical in Car-Parrinello molecular dynamics simulations of porphyrin-fullerene dyads

    Karilainen, T., Cramariuc, O., Kuisma, M., Tappura, K. & Hukka, T. I., 2015, In : Journal of Computational Chemistry. 36, 9, p. 612-621 10 p.

    Research output: Contribution to journalArticleScientificpeer-review