Tampere University of Technology

TUTCRIS Research Portal

Publications

  1. 2010
  2. Published

    Fractional particle swarm optimization in multidimensional search space

    Kiranyaz, S., Ince, T., Yildirim, A. & Gabbouj, M., 2010, In : IEEE Transactions on Systems, Man, and Cybernetics, Part B: Cybernetics. 40, 2, p. 298-319

    Research output: Contribution to journalArticleScientificpeer-review

  3. Published

    Framework for high-quality software design and development: a systematic approach

    Jaakkola, H. & Thalheim, B., 2010, In : IET Software. 4, 2, p. 105-118 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  4. Published

    Framing the Context of User for Mobile HCI

    Jumisko-Pyykkö, S. & Vainio, T., 2010, In : International Journal of Mobile Human Computer Interaction. 2, 4, p. 1-28 28 p.

    Research output: Contribution to journalArticleScientificpeer-review

  5. Published

    From genetic markers to characteristic regulators in soft-tissue sarcomas

    Ylipää, A., Yli-Harja, O., Zhang, W. & Nykter, M., 2010, Proceedings of the Seventh International Workshop on Computational Systems Biology, WCSB 2010, Luxembourg, June 16-18, 2010. TICSP Series. Nykter, M., Ruusuvuori, P., Carlberg, C. & Yli-Harja, O. (eds.). p. 4

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  6. Published

    From local Kernel to nonlocal multiple-model image denoising

    Katkovnik, V., Foi, A., Egiazarian, K. & Astola, J., 2010, In : International Journal of Computer Vision. 86, 1, p. 1-32 32 p.

    Research output: Contribution to journalArticleScientificpeer-review

  7. Published

    From proprietary to open source: Building a network of trust

    Sirkkala, P., Hammouda, I. & Aaltonen, T., 2010, Proceedings of Second International Workshop on Building Sustainable Open Source Communities OSCOMM 2010, June 2nd 2010, Notre Dame, IN, USA. p. 26-30

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  8. Published

    Gap-filling for the high-resolution PET sinograms with a dedicated DCT-domain filter

    Tuna, U., Peltonen, S. & Ruotsalainen, U., 2010, In : IEEE Transactions on Medical Imaging. 29, 3, p. 830-839

    Research output: Contribution to journalArticleScientificpeer-review

  9. Published

    Gap-filling methods for 3D PlanTIS data

    Loukiala, A., Tuna, U., Beer, S., Jahnke, S. & Ruotsalainen, U., 2010, In : Physics in Medicine and Biology. 55, 20, p. 6125-6139

    Research output: Contribution to journalArticleScientificpeer-review

  10. Published

    Genetic approach to software architecture synthesis with work allocation scheme

    Hadaytullah, H., Räihä, O. & Koskimies, K., 2010, The 17th Asia-Pasific Software Engineering Conference APSEC 2010, 30 November - 3 December 2010, Sydney, Australia. p. 70-79

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  11. Published

    Genome-wide analysis of effectors of peroxisome biogenesis

    Saleem, R. A., Long-O'Donnell, R., Dilworth, D. J., Armstrong, A. M., Jamakhandi, A. P., Wan, Y., Knijnenburg, T. A., Niemistö, A., Boyle, J., Rachubinski, R. A., Shmulevich, I. & Aitchison, J. D., 2010, In : PLoS ONE. 5, 8, e11953, p. 1-11 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  12. Published

    Genome-wide profiling of interleukin-4 and STAT6 transcription factor regulation of human Th2 cell programming

    Elo, L. L., Järvenpää, H., Tuomela, S., Raghav, S., Ahlfors, H., Laurila, K., Gupta, B., Lund, R. J., Tahvanainen, J., Hawkins, R. D., Oresic, M., Lähdesmäki, H., Rasool, O., Rao, K. V., Aittokallio, T. & Lahesmaa, R., 2010, In : Immunity. 32, 6, p. 852-862

    Research output: Contribution to journalArticleScientificpeer-review

  13. Published

    Geo-predictive real-time media delivery in mobile environment

    Curcio, I. D. D., Malamal Vadakital, V. K. & Hannuksela, M. M., 2010, Proceedings of ACM MM'10 Multimedia 2010, MoViD '10 the 3rd workshop on Mobile video delivery, Firenze, Italy, October 25-29, 2010. p. 3-8

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  14. Published

    Greedy RLS for sparse filters

    Dumitrescu, B. & Tabus, I., 2010, Proceedings of the 18th European Signal Processing Conference, Eusipco 2010, Aalborg, Denmark, 23-27 August 2010. p. 1484-1488

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  15. Published

    Henkilökohtaisen terveydenseuranta ja liityntästandardit. Kartoitus tilanteesta vuoden 2010 alussa

    Junnila, S. & Värri, A., 2010, Terveyden ja hyvinvoinnin laitos, Avauksia. Väinälä, A. & Hyppönen, H. (eds.). p. 28-34

    Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

  16. Published

    Heterogeneous Decision Diagrams for Applications in Harmonic Analysis on Finite non-Abelian Groups

    Stankovic, S., Astola, J., Miller, M. D. & Stankovic, R. S., 2010, 40th IEEE International Symposium on Multiple-Valued Logic ISMVL 2010, May 26 - 28, 2010. p. 307-312

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  17. Published

    Hierarchical classification of dynamically varying radar pulse repetition interval modulation patterns

    Kauppi, J-P., Martikainen, K. & Ruotsalainen, U., 2010, In : Neural Networks. 23, 10, p. 1226-1237

    Research output: Contribution to journalArticleScientificpeer-review

  18. Published

    High-resolution DNA analysis of human embryonic stem cell lines reveals culture-induced copy number changes and loss of heterozygosity

    Närvä, E., Autio, R., Rahkonen, N., Kong, L., Harrison, N., Kitsberg, D., Borghese, L., Itskovitz-Eldor, J., Rassool, O., Dvorak, P., Hovatta, O., Otonkoski, T., Tuuri, T., Cui, W., Brüstle, O., Baker, D., Maltby, E., Moore, H. D., Benvenisty, N., Andrews, P. W., Yli-Harja, O. & Lahesmaa, R., 2010, In : Nature Biotechnology. 28, 4, p. 371-377

    Research output: Contribution to journalArticleScientificpeer-review

  19. Published

    Hyperspectral detection of marine clay in coastal waters using the spectral angle method

    Tuominen, J., Lipping, T., Kuosmanen, V. & Repka, S., 2010, In : EAR Se L eProceedings. 9, 2, p. 31-41

    Research output: Contribution to journalArticleScientificpeer-review

  20. Published

    IamDJ: SAME, Sound And Music For Everyone Everyday Everywhere Everyway, Design Contest: Call for Proposals Future Mobile Music

    Perttula, A., 2010

    Research output: Artistic and non-textual formDesignSolo art production

  21. Published

    ICA based automatic segmentation of dynamic H 2 15 O cardiac PET images

    Magadan-Mendez, M., Juslin, A., Nesterov, S. V., Kalliokoski, K., Knuuti, J. & Ruotsalainen, U., 2010, In : IEEE Transactions on Information Technology in Biomedicine. 14, 3, p. 795-802

    Research output: Contribution to journalArticleScientificpeer-review

  22. Published

    Identification of Genes Involved In the Differentation Process from Human Embryonic Stem Cells to Neural Progenitor Cells

    Kong, L., Rautajoki, K., Yli-Harja, O. & Autio, R., 2010, Proceedings of the Seventh International Workshop on Computational Systems Biology, WCSB 2010, Luxembourg, June 16-18, 2010. TICSP Series. Nykter, M., Ruusuvuori, P., Carlberg, C. & Yli-Harja, O. (eds.). p. 1 p

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  23. Published

    Identifying drivers and hindrances of social user experience in web services

    Väänänen-Vainio-Mattila, K., Wäljas, M., Ojala, J. & Segerstål, K., 2010, CHI 2010 Conference on Human Factors in Computing Systems. Proceedings of the 28th of the International Conference Extended Abstracts on Human Factors in Computing Systems, Atlanta, Georgia, USA, April 10-15, 2010. p. 2499-2502

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  24. Published

    Identity verification based on vessel matching from fundus images

    Oinonen, H., Forsvik, H., Ruusuvuori, P., Yli-Harja, O., Voipio, V. & Huttunen, H., 2010, Proceedings of the 17th IEEE International Conference on Image Processing ICIP, Hong Kong, September 26-29, 2010. p. 4089-4092

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  25. Published

    I don't mind deing logged, but want to remain in control: A field study of mobile activity and context logging

    Kärkkäinen, T., Vaittinen, T. & Väänänen-Vainio-Mattila, K., 2010, CHI 2010 Proceedings of the 28th International Conference on Human Factors in Computing Systems, Altanta, Georgia, USA, April 10-15, 2010. p. 163-172

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  26. Published

    Image-based feedback control for real-time sorting of microspheres in a microfluidic device

    Munson, M. S., Spotts, J. M., Niemistö, A., Selinummi, J., Kralj, J. G., Salit, M. L. & Ozinsky, A., 2010, In : Lab on a Chip. 10, 18, p. 2402-2410

    Research output: Contribution to journalArticleScientificpeer-review

  27. Published

    Image-based phenotyping of complex yeast strains

    Ruusuvuori, P., Scott, A., Garmendia-Torres, C., Dudley, A. & Shmulevich, I., 2010, Proceedings of the Seventh International Workshop on Computational Systems Biology, WCSB 2010, Luxembourg, June 16-18, 2010. TICSP Series. Nykter, M., Ruusuvuori, P., Carlberg, C. & Yli-Harja, O. (eds.). p. 145

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  28. Published

    Image deblurring by augmented Langrangian with BM3D frame prior

    Danielyan, A., Katkovnik, V. & Egiazarian, K., 2010, Proceedings of the Third Workshop on Information Theoretic Methods in Science and Engineering, August 16-18, 2010, Tampere, Finland. p. 6 p

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  29. Published

    Impact of downsampling ratio in mixed-resolution stereoscopic video

    Aflaki, P., Hannuksela, M. M., Häkkinen, J., Lindroos, P. & Gabbouj, M., 2010, Proceedings of 3DTV-Conference: The True Vision - Capture, Transmission and Display of 3D Video (3DTV-CON), 2010, Tampere, Finland, June 7-9, 2010. p. 1-4 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  30. Published

    Implementation of linear-phase FIR nearly perfect reconstruction cosine-modulated filterbanks utilizing the coefficient symmetry

    Bregovic, R., Yu, Y. J., Viholainen, A. & Lim, Y. C., 2010, In : IEEE Transactions on Circuits and Systems. Part 1: Regular Papers. 57, 1, p. 139-151

    Research output: Contribution to journalArticleScientificpeer-review

  31. Published

    Implicit malpractice and suspicious traffic detection in large scale IP networks

    Seppälä, T., Alapaholuoma, T., Knuuti, O., Ylinen, J., Loula, P. & Hätönen, K., 2010, Proceedings, The Fifth International Conference on Internet Monitoring and Protection ICIMP 2010, 9-15 May 2010, Barcelona, Spain. Lloret, M. J. & Popescu, M. (eds.). p. 135-140

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  32. Published

    Improved estimates of partial volume coefficients from noisy brain MRI using spatial context

    Manjon, J. V., Tohka, J. & Robles, M., 2010, In : NeuroImage. 53, 2, p. 480-490

    Research output: Contribution to journalArticleScientificpeer-review

  33. Published

    Improved method for blind estimation of the variance of mixed noise using weighted LMS line fitting algorithm

    Abramov, S., Zabrodina, V., Lukin, V., Vozel, B., Chehdi, K. & Astola, J., 2010, Proceedings of 2010 IEEE International Symposium on Circuits and Systems, ISCAS 2010, Paris, France, May 30 - June 2, 2010. p. 2642-2645

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  34. Improved prediction for layered predictive animated mesh compression

    Bici, M. O. & Akar, G. B., 2010, Proceedings of 2010 IEEE 17th International Conference on Image Processing, ICIP 2010, Hong Kong, 26-29 September 2010. p. 3413-3416

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  35. Published

    Improving correlation between microarrays and transcriptome sequencing through probe set analysis

    Annala, M., Yli-Harja, O., Shmulevich, I. & Nykter, M., 2010, Proceedings of the Seventh International Workshop on Computational Systems Biology, WCSB 2010, Luxembourg, June 16-18, 2010. TICSP Series. Nykter, M., Ruusuvuori, P., Carlberg, C. & Yli-Harja, O. (eds.). p. 4 p

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  36. Published

    Improving image quality assessment with modeling visual attention

    You, J., Perkis, A. & Gabbouj, M., 2010, Visual Information Processing (EUVIP), Paris, France, 5-6 July 2010. Piscataway, NJ: IEEE, p. 177-182

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  37. Published

    Inferring genetic regulatory interactions from time-collapsed Boolean summary variables

    Erkkilä, T., Thorsson, V., Lähdesmäki, H. & Shmulevich, I., 2010, Proceedings of the Seventh International Workshop on Computational Systems Biology, WCSB 2010, Luxembourg, June 16-18, 2010. TICSP Series. Nykter, M., Ruusuvuori, P., Carlberg, C. & Yli-Harja, O. (eds.). p. 4 p

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  38. Published

    Influence of Camera Parameters on the Quality of Mobile 3D Capture

    Georgiev, M., Boev, A., Gotchev, A. & Hannuksela, M., 2010, Multimedia on Mobile Devices 2010, 18–19 January 2010, San Jose, California, USA. Proceedings of SPIE. Creutzburg, R. & Akopian, D. (eds.). Bellingham, WA: SPIE, p. 1-12 12 p. 75420U

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  39. Published

    Information flow in systems of interacting agents as a function of local and global topological features

    S. Ribeiro, A., 2010, Computational Social Network Analysis. Abraham, A., Hassanien, A-E. & Snasel, V. (eds.). Springer, p. 34

    Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

  40. Published

    Information Modelling and Knowledge Bases XXI

    Welzer Druzovec, T. (ed.), Jaakkola, H. (ed.), Kiyoki, Y. (ed.), Tokuda, T. (ed.) & Yoshida, N. (ed.), 2010, Amsterdam: IOS Press. (Frontiers in Artificial Intelligence and Applications; vol. 206)

    Research output: Book/ReportAnthologyScientificpeer-review

  41. Published

    Information propagation within the genetic network of Saccharomyces cerevisiae

    Chowdhury, S., Lloyd-Price, J., Smolander, O-P., Baici, W. C. V., Hughes, T. R., Yli-Harja, O., Chua, G. & Ribeiro, A. S., 2010, In : BMC Systems Biology. 4, 143, p. 1-10 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  42. Published

    Information systems - Fit or hit the needs

    Uusitalo, O., Jaakkola, H. & Gronhaug, K., 2010, Proceedings of 33rd International convention on information and communication technology, electronics and microelectronics, MIPRO 2010, May 24-28, 2010, Opatija, Croatia. p. 25-32

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  43. Published

    Initiating quality management in a small software enterprise

    Suula, M., Mäkinen, T. & Varkoi, T., 2010, 17th Eurospi2 Conference, Industrial Proceedings, 1.-3. September 2010, Grenoble Institute of Technology, France. Messnarz, R. (ed.). p. 8.1-8.12 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  44. Published

    Integrated proteomics and genomics analysis reveals a novel mesenchymal to epithelial reverting transition in leiomyosarcoma through regulation of slug

    Yang, J., Eddy, J. A., Pan, Y., Hategan, A., Tabus, I., Wang, Y., Cogdell, D., Price, N. D., Pollock, R. E., Lazar, A. J. F., Hunt, K. K., Trent, J. C. & Zhang, W., 2010, In : Molecular and Cellular Proteomics. 9, 11, p. 2405-2413

    Research output: Contribution to journalArticleScientificpeer-review

  45. Published

    Interleaved quantization-optimization and predictor structure selection for lossless compression of audio companded signals

    Tabus, I., Tabus, V. & Astola, J., 2010, Proceedings of the 4th International Symposium on Communication, Control and Signal Processing, ISCCSP 2010, Limassol, Cyprus, 3-5 March 2010. p. 1-6 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  46. Published

    Internetin videojakopalvelut - älypuhelin päätelaitteena

    Perttula, A. & Suominen, M., 2010, Yhdessä ja liikkeellä, mobiili sosiaalinen media. Tampereen teknillinen yliopisto. Porin yksikkö. Julkaisu. Multisilta, J., Mäenpää, M. & Suominen, J. (eds.). Tampere: Aalto-yliopisto. Tampereen teknillinen yliopisto. Turun yliopisto, p. 73-89

    Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

  47. Published

    Inter-subject correlation matrix clustering in functional magnetic resonance imaging

    Kauppi, J-P., 2010, Digest of TISE Seminar 2010, Ylöjärvi, Finland, 26.5.2010. TISE Publications. Koivisto, P. (ed.). p. 154-159

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientific

  48. Published

    Inter-subject correlation of brain hemodynamic responses during watching a movie: localization in space and frequency

    Kauppi, J-P., Jääskeläinen, I. P., Sams, M. & Tohka, J., 2010, In : Frontiers in Neuroinformatics. 4, Article 5, p. 1-10 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  49. Published

    Introducing correlations into median-field Boolean network models

    Kesseli, J. & Yli-Harja, O., 2010, Proceedings of the Seventh International Workshop on Computational Systems Biology, WCSB 2010, Luxembourg, June 16-18, 2010. TICSP Series. Nykter, M., Ruusuvuori, P., Carlberg, C. & Yli-Harja, O. (eds.). p. 4 p

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  50. Published

    Introduction and motivation

    Fitzek, F. H. P., Torp, T. & Mikkonen, T., 2010, Qt for Symbian. Fitzek, F. H. P., Mikkonen, T. & Torp, T. (eds.). p. 1-11 11 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

  51. Published

    Introduction Game and Playful Experiences to other Application Domains through Personality and Motivation Models

    Walsh, R., Boberg, M., Arrasvuori, J., Korhonen, H. & Walsh, T., 2010, 2nd International IEEE Consumer Electronic Society Games Innovation Conference, GIC 2010, December 21-23, 2010, Hongkong. p. 179-186

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

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