Tampere University of Technology

TUTCRIS Research Portal

Publications

  1. 2020
  2. Published

    Cell adhesion and culture medium dependent changes in the high frequency mechanical vibration induced proliferation, osteogenesis, and intracellular organization of human adipose stem cells

    Halonen, H. T., Ihalainen, T. O., Hyväri, L., Miettinen, S. & Hyttinen, J. A. K., 1 Jan 2020, In : Journal of the Mechanical Behavior of Biomedical Materials. 101, 103419.

    Research output: Contribution to journalArticleScientificpeer-review

  3. Published

    Co-culture of human induced pluripotent stem cell-derived retinal pigment epithelial cells and endothelial cells on double collagen-coated honeycomb films

    Calejo, M. T., Saari, J., Vuorenpää, H., Vuorimaa-Laukkanen, E., Kallio, P., Aalto-Setälä, K., Miettinen, S., Skottman, H., Kellomäki, M. & Juuti-Uusitalo, K., 2020, In : Acta Biomaterialia. 101, p. 327-343 17 p.

    Research output: Contribution to journalArticleScientificpeer-review

  4. Published

    Ectopic Beat Detection from Wrist Optical Signals for Sinus Rhythm and Atrial Fibrillation Subjects

    Haddad, S., Harju, J., Tarniceriu, A., Halkola, T., Parak, J., Korhonen, I., Yli-Hankala, A. & Vehkaoja, A., 2020, 15th Mediterranean Conference on Medical and Biological Engineering and Computing – MEDICON 2019 - Proceedings of MEDICON 2019. Henriques, J., de Carvalho, P. & Neves, N. (eds.). Springer, p. 150-158 9 p. (IFMBE Proceedings; vol. 76).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  5. Published

    Tidal breathing flow profiles during sleep in wheezing children measured by impedance pneumography

    Gracia-Tabuenca, J., Seppä, V-P., Jauhiainen, M., Paassilta, M., Viik, J. & Karjalainen, J., 2020, In : Respiratory Physiology and Neurobiology. 271, 103312.

    Research output: Contribution to journalArticleScientificpeer-review

  6. 2019
  7. Published

    Analysis of ATP-Induced Ca2+ Responses at Single Cell Level in Retinal Pigment Epithelium Monolayers.

    Sorvari, J., Viheriälä, T., Ilmarinen, T., Ihalainen, T. & Nymark, S., 29 Dec 2019, Retinal Degenerative Diseases: Mechanisms and Experimental Therapy. Springer, p. 525-530 6 p. (Advances in Experimental Medicine and Biology; vol. 1185).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  8. Published

    Data-driven multiscale modeling reveals the role of metabolic coupling for the spatio-temporal growth dynamics of yeast colonies

    Intosalmi, J., Scott, A. C., Hays, M., Flann, N., Yli-Harja, O., Lähdesmäki, H., Dudley, A. M. & Skupin, A., 19 Dec 2019, In : BMC Molecular and Cell Biology. 20, 1, 13 p., 59.

    Research output: Contribution to journalArticleScientificpeer-review

  9. Published

    Battling Glioblastoma: A Novel Tyrosine Kinase Inhibitor with Multi-Dimensional Anti-Tumor Effect (Running Title: Cancer Cells Death Signalling Activation)

    Viswanathan, A., Musa, A., Murugesan, A., Vale, J. R., Afonso, C. A. M., Konda Mani, S., Yli-Harja, O., Candeias, N. R. & Kandhavelu, M., 12 Dec 2019, In : Cells. 8, 12, 18 p., 1624.

    Research output: Contribution to journalArticleScientificpeer-review

  10. Published

    Synthesis and preclinical validation of novel P2Y1 receptor ligands as a potent anti-prostate cancer agent

    Le, H. T. T., Rimpilainen, T., Konda Mani, S., Murugesan, A., Yli-Harja, O., Candeias, N. R. & Kandhavelu, M., 12 Dec 2019, In : Scientific Reports. 9, 18938.

    Research output: Contribution to journalArticleScientificpeer-review

  11. Accepted/In press

    Accelerated simulation of a neuronal population via mathematical model order reduction

    Lehtimäki, M., Seppälä, I., Paunonen, L. & Linne, M-L., 10 Dec 2019, (Accepted/In press) Proceedings of the IEEE International Conference on Artificial Intelligence Circuits and Systems. IEEE Xplore

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  12. E-pub ahead of print

    Textile-Based Batteryless Moisture Sensor

    Chen, X., He, H., Khan, Z., Sydanheimo, L., Ukkonen, L. & Virkki, J., 6 Dec 2019, In : IEEE Antennas and Wireless Propagation Letters.

    Research output: Contribution to journalArticleScientificpeer-review

  13. Published

    Changes in hemodynamics associated with metabolic syndrome are more pronounced in women than in men

    Kangas, P., Tikkakoski, A., Kettunen, J., Eräranta, A., Huhtala, H., Kähönen, M., Sipilä, K., Mustonen, J. & Pörsti, I., 5 Dec 2019, In : Scientific Reports. 9, 1, 11 p., 18377.

    Research output: Contribution to journalArticleScientificpeer-review

  14. Published

    Comparing biological information contained in mRNA and non-coding RNAs for classification of lung cancer patients

    Smolander, J., Stupnikov, A., Glazko, G., Dehmer, M. & Emmert-Streib, F., 3 Dec 2019, In : BMC Cancer. 19, 1, 1176.

    Research output: Contribution to journalArticleScientificpeer-review

  15. Published

    Automatic classification of IgA endomysial antibody test for celiac disease: a new method deploying machine learning

    Caetano dos Santos, F. L., Michalek, I. M., Laurila, K., Kaukinen, K., Hyttinen, J. & Lindfors, K., 1 Dec 2019, In : Scientific Reports. 9, 1, 9217.

    Research output: Contribution to journalArticleScientificpeer-review

  16. Published

    Transcription closed and open complex formation coordinate expression of genes with a shared promoter region

    Häkkinen, A., Oliveira, S. M. D., Neeli-Venkata, R. & Ribeiro, A. S., 1 Dec 2019, In : Journal of the Royal Society Interface. 16, 161, 11 p., 20190507.

    Research output: Contribution to journalArticleScientificpeer-review

  17. Published

    Tissue adhesive hyaluronic acid hydrogels for sutureless stem cell delivery and regeneration of corneal epithelium and stroma

    Koivusalo, L., Kauppila, M., Samanta, S., Parihar, V. S., Ilmarinen, T., Miettinen, S., P. Oommen, O. & Skottman, H., Dec 2019, In : Biomaterials. 225, 119516.

    Research output: Contribution to journalArticleScientificpeer-review

  18. E-pub ahead of print

    Sources of variability in expiratory flow profiles during sleep in healthy young children

    Hult, A., Juraški, R. G., Gracia-Tabuenca, J., Partinen, M., Plavec, D. & Seppä, V-P., 30 Nov 2019, In : Respiratory Physiology and Neurobiology.

    Research output: Contribution to journalArticleScientificpeer-review

  19. E-pub ahead of print

    A device for measuring sternal bone connectivity using vibration analysis techniques

    Joutsen, A., Hautalahti, J., Jaatinen, E., Goebeler, S., Paldanius, A., Viik, J., Laurikka, J. & Hyttinen, J., 15 Nov 2019, In : Proceedings of the Institution of Mechanical Engineers Part H: Journal of Engineering in Medicine. 10 p., 0954411919884802.

    Research output: Contribution to journalArticleScientificpeer-review

  20. Published

    Development and Characterization of Gellan Gum Based Hydrogels for Soft Tissue Engineering Applications

    Koivisto, J., 15 Nov 2019, Tampere: Tampere University. 146 p. (Tampere University Dissertations; vol. 162)

    Research output: Book/ReportDoctoral thesisCollection of Articles

  21. Published

    Phosphorylation of NFATC1 at PIM1 target sites is essential for its ability to promote prostate cancer cell migration and invasion

    Eerola, S. K., Santio, N. M., Rinne, S., Kouvonen, P., Corthals, G. L., Scaravilli, M., Scala, G., Serra, A., Greco, D., Ruusuvuori, P., Latonen, L., Rainio, E. M., Visakorpi, T. & Koskinen, P. J., 15 Nov 2019, In : CELL COMMUNICATION AND SIGNALING. 17, 1, 148.

    Research output: Contribution to journalArticleScientificpeer-review

  22. Published

    Utilizing Social Media Data for Psychoanalysis to Study Human Personality

    Emmert-Streib, F., Yli-Harja, O. & Dehmer, M., 15 Nov 2019, In : Frontiers in Psychology. 10, 2596.

    Research output: Contribution to journalArticleScientificpeer-review

  23. Published

    Model order reduction of multiscale models in neuroscience

    Seppälä, I., Lehtimäki, M., Paunonen, L. & Linne, M-L., 14 Nov 2019.

    Research output: Other conference contributionPaper, poster or abstractScientific

  24. Published

    Kinetic Energy Harvesting for Wearable Medical Sensors

    Gljušćić, P., Zelenika, S., Blažević, D. & Kamenar, E., 12 Nov 2019, In : Sensors. 19, 4922

    Research output: Contribution to journalArticleScientificpeer-review

  25. E-pub ahead of print

    General principles for the validation of proarrhythmia risk prediction models: an extension of the CiPA In Silico strategy

    Li, Z., Mirams, G., Yoshinaga, T., Ridder, B., Han, X., Chen, J. E., Stockbridge, N. L., Wisialowski, T. A., Damiano, B., Severi, S., Morissette, P., Kowey, P. R., Holbrook, M., Smith, G., Rasmusson, R. L., Liu, M., Song, Z., Qu, Z., Leishman, D. J., Steidl‐Nichols, J., Rodriguez, B., Bueno-Orovio, A., Zhou, X., Passini, E., Edwards, A. G., Morotti, S., Ni, H., Grandi, E., Clancy, C. E., Vandenberg, J., Hill, A., Nakamura, M., Singer, T., Polonchuk, L., Greiter‐Wilke, A., Wang, K., Nave, S., Fullerton, A., Sobie, E. A., Paci, M., Tshinanu, F. M. & Strauss, D. G., 10 Nov 2019, In : CLINICAL PHARMACOLOGY AND THERAPEUTICS. 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  26. Published

    Alternative Electrode Materials for Prototyping Cell Model-Specific Microelectrode Arrays

    Ryynänen, T., 8 Nov 2019, Tampere University. 82 p. (Tampere University Dissertations; vol. 123)

    Research output: Book/ReportDoctoral thesisCollection of Articles

  27. Published

    Carbon nanotube micropillars trigger guided growth of complex human neural stem cells networks

    Lorite, G. S., Ylä-Outinen, L., Janssen, L., Pitkänen, O., Joki, T., Koivisto, J. T., Kellomäki, M., Vajtai, R., Narkilahti, S. & Kordas, K., 1 Nov 2019, In : Nano Research. 12, 11, p. 2894-2899 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  28. Published

    Hyaluronan derived nanoparticle for simvastatin delivery: evaluation of simvastatin induced myotoxicity in tissue engineered skeletal muscle

    Jones, J. M., Player, D. J., Samanta, S., Rangasami, V. K., Hilborn, J., Lewis, M. P., P. Oommen, O. & Mudera, V., 1 Nov 2019, In : Biomaterials Science.

    Research output: Contribution to journalArticleScientificpeer-review

  29. E-pub ahead of print

    Co-culture of human induced pluripotent stem cell-derived retinal pigment epithelial cells and endothelial cells on double collagen-coated honeycomb films

    Rebelo Calejo, T., Vuorenpää, H., Vuorimaa-Laukkanen, E., Kallio, P., Aalto-Setälä, K., Miettinen, S., Skottman, H., Kellomäki, M. & Juuti-Uusitalo, K., Nov 2019, In : Acta Biomaterialia. p. 327-343

    Research output: Contribution to journalArticleScientificpeer-review

  30. Published

    A Smart Chair Physiotherapy Exergame for Fall Prevention – User Experience Study

    Merilampi, S., Mulholland, K., Ihanakangas, V., Ojala, J., Valo, P. & Virkki, J., 28 Oct 2019, 2019 IEEE 7th International Conference on Serious Games and Applications for Health (SeGAH). IEEE, 5 p. (IEEE International Conference on Serious Games and Applications for Health).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  31. E-pub ahead of print

    Noninvasive Cardiorespiratory Signals Analysis for Asthma Evolution Monitoring in Preschool Children

    Milagro, J., Gracia, J., Seppä, V-P., Karjalainen, J., Paassilta, M., Orini, M., Bailón, R., Gil, E. & Viik, J., 28 Oct 2019, In : IEEE Transactions on Biomedical Engineering.

    Research output: Contribution to journalArticleScientificpeer-review

  32. Accepted/In press

    Direct Measurement of Contraction Force in Human Cardiac Tissue Model Using Piezoelectric Cantilever Sensor Technique

    Virtanen, J., Toivanen, M., Toimela, T., Heinonen, T. & Tuukkanen, S., 25 Oct 2019, (Accepted/In press) In : Current Applied Physics. 20, 1, p. 155-160 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  33. Published

    Wireless Power Transfer to Intra-Abdominal Implants Using an Around-the-Body Loop Antenna

    Ahmed, S., Sydänheimo, L., Ukkonen, L. & Björninen, T., 24 Oct 2019, 2019 International Conference on Electromagnetics in Advanced Applications (ICEAA). IEEE, p. 0055-0059 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  34. Published

    Estimating RNA numbers in single cells by RNA fluorescent tagging and flow cytometry

    Bahrudeen, M. N. M., Chauhan, V., Palma, C. S. D., Oliveira, S. M. D., Kandavalli, V. K. & Ribeiro, A. S., 22 Oct 2019, In : Journal of Microbiological Methods. 166, 105745.

    Research output: Contribution to journalArticleScientificpeer-review

  35. Published

    3D-Printed Whole Prostate Models with Tumor Hotspots Using Dual-Extruder Printer

    Liimatainen, K., Latonen, L., Kartasalo, K. & Ruusuvuori, P., 7 Oct 2019, 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC). IEEE, p. 2867-2871 5 p. (Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  36. Published

    Augmenting Soft Tissue Contrast Using Edge-Enhancing Phase-Imaging Techniques in X-Ray Microtomography

    Reunamo, A., Hannula, M. & Hyttinen, J., 7 Oct 2019, 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC). IEEE, p. 4867-4870 4 p. (Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  37. Published

    Effect of Different ECG Leads on Estimated R–R Intervals and Heart Rate Variability Parameters

    Jeyhani, V., Mäntysalo, M., Noponen, K., Seppänen, T. & Vehkaoja, A., 7 Oct 2019, 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC). IEEE, p. 3786-3790 5 p. (Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  38. Published

    Prediction of Self-Perceived Stress and Arousal Based on Electrodermal Activity

    Pakarinen, T., Pietilä, J. & Nieminen, H., 7 Oct 2019, 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC). IEEE, p. 2191-2195 5 p. (Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  39. Published

    Chondrogenic differentiation of human bone marrow-derived mesenchymal stromal cells in a three-dimensional environment

    Salonius, E., Kontturi, L., Laitinen, A., Haaparanta, A-M., Korhonen, M., Nystedt, J., Kiviranta, I. & Muhonen, V., 25 Sep 2019, In : Journal of Cellular Physiology. 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  40. Published

    Phosphate Glasses and Fibers as an Alternative to Silicate Bioactive Glasses

    Mishra, A., 20 Sep 2019, Tampere University. 145 p. (Tampere University Dissertations; vol. 120)

    Research output: Book/ReportDoctoral thesisCollection of Articles

  41. Published

    MATHEMATICAL MODEL ORDER REDUCTION OF A FOKKER-PLANCK MEAN-FIELD MODEL

    Lehtimäki, M., Seppälä, I., Paunonen, L. & Linne, M-L., 18 Sep 2019.

    Research output: Other conference contributionPaper, poster or abstractScientific

  42. Published

    Unique Features of Network Bursts Emerge From the Complex Interplay of Excitatory and Inhibitory Receptors in Rat Neocortical Networks

    Teppola, H., Aćimović, J. & Linne, M. L., 6 Sep 2019, In : FRONTIERS IN CELLULAR NEUROSCIENCE. 13, 377.

    Research output: Contribution to journalArticleScientificpeer-review

  43. Published

    Effect of melt-derived bioactive glass particles on the properties of chitosan scaffolds

    Faqhiri, H., Hannula, M., Kellomäki, M., Calejo, M. T. & Massera, J., 1 Sep 2019, In : JOURNAL OF FUNCTIONAL BIOMATERIALS. 10, 3, 38.

    Research output: Contribution to journalArticleScientificpeer-review

  44. Published

    Porous polybutylene succinate films enabling adhesion of human embryonic stem cell-derived retinal pigment epithelial cells (hESC-RPE)

    Calejo, M. T., Haapala, A., Skottman, H. & Kellomäki, M., 1 Sep 2019, In : European Polymer Journal. 118, p. 78-87 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  45. Published

    User-driven development with scientific applied research - RFID-controlled physiogame case study

    Merilampi, S., Ihanakangas, V. & Virkki, J., 1 Sep 2019, 2019 IEEE International Conference on RFID Technology and Applications (RFID-TA). IEEE, p. 167-170 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  46. Published

    Processing methods for making porous bioactive glass-based scaffolds-A state-of-the-art review

    Baino, F., Fiume, E., Barberi, J., Kargozar, S., Marchi, J., Massera, J. & Verne, E., Sep 2019, In : International Journal of Applied Ceramic Technology. 16, 5, p. 1762-1796 35 p.

    Research output: Contribution to journalReview ArticleScientificpeer-review

  47. E-pub ahead of print

    Bioactive glass ions for in vitro osteogenesis and microvascularization in gellan gum-collagen hydrogels

    Vuornos, K., Huhtala, H., Kääriäinen, M., Kuismanen, K., Hupa, L., Kellomäki, M. & Miettinen, S., 31 Aug 2019, In : Journal of Biomedical Materials Research - Part B Applied Biomaterials.

    Research output: Contribution to journalArticleScientificpeer-review

  48. Published

    Design of modular gellan gum hydrogel functionalized with avidin and biotinylated adhesive ligands for cell culture applications

    Gering, C., Koivisto, J. T., Parraga, J., Leppiniemi, J., Vuornos, K., Hytönen, V. P., Miettinen, S. & Kellomäki, M., 30 Aug 2019, In : PLoS ONE. 14, 8, e0221931.

    Research output: Contribution to journalArticleScientificpeer-review

  49. Published

    IEC 62304 Ed. 2: Software Life Cycle Standard for Health Software

    Värri, A., Kranz-Zuppan, P. & de la Cruz, R., 23 Aug 2019, Medinfo 2019: Proceedings of the 17th World Congress on Medical and Health Informatics. Ohno-Machado, L. & Séroussi, B. (eds.). IOP Press, p. 868-872 5 p. (Studies in Health Technology and Informatics; vol. 264).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  50. E-pub ahead of print

    Pneumatic unidirectional cell stretching device for mechanobiological studies of cardiomyocytes

    Kreutzer, J., Viehrig, M., Pölönen, R. P., Zhao, F., Ojala, M., Aalto-Setälä, K. & Kallio, P., 23 Aug 2019, In : BIOMECHANICS AND MODELING IN MECHANOBIOLOGY.

    Research output: Contribution to journalArticleScientificpeer-review

  51. Published

    Health timeline: an insight-based study of a timeline visualization of clinical data

    Ledesma, A., Bidargaddi, N., Strobel, J., Schrader, G., Nieminen, H., Korhonen, I. & Ermes, M., 22 Aug 2019, In : BMC Medical Informatics and Decision Making. 19, 1, 170.

    Research output: Contribution to journalArticleScientificpeer-review

  52. Published

    Influence of ions to modulate hydrazone and oxime reaction kinetics to obtain dynamically cross-linked hyaluronic acid hydrogels

    Wang, S., Nawale, G. N., Oommen, O. P., Hilborn, J. & Varghese, O. P., 21 Aug 2019, In : Polymer Chemistry. 10, 31, p. 4322-4327 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

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