Tampere University of Technology

TUTCRIS Research Portal

Publications

  1. 2020
  2. Published

    Combining deep learning with token selection for patient phenotyping from electronic health records

    Yang, Z., Dehmer, M., Yli-Harja, O. & Emmert-Streib, F., 1 Dec 2020, In : Scientific Reports. 10, 1, 1432.

    Research output: Contribution to journalArticleScientificpeer-review

  3. Published

    Mechanism of homodimeric cytokine receptor activation and dysregulation by oncogenic mutations

    Wilmes, S., Hafer, M., Vuorio, J., Tucker, J. A., Winkelmann, H., Löchte, S., Stanly, T. A., Pulgar Prieto, K. D., Poojari, C., Sharma, V., Richter, C. P., Kurre, R., Hubbard, S. R., Christopher Garcia, K., Moraga, I., Vattulainen, I., Hitchcock, I. S. & Piehler, J., 7 Feb 2020, In : Science. 367, 6478, p. 643-652 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  4. Published

    Three-Dimensional Printing of the Nasal Cavities for Clinical Experiments

    Valtonen, O., Ormiskangas, J., Kivekäs, I., Rantanen, V., Dean, M., Poe, D., Järnstedt, J., Lekkala, J., Saarenrinne, P. & Rautiainen, M., 16 Jan 2020, In : Scientific Reports. 10, 1, 1 p.

    Research output: Contribution to journalArticleScientificpeer-review

  5. Published

    Automatic Posture and Movement Tracking of Infants with Wearable Movement Sensors

    Airaksinen, M., Räsänen, O., Ilén, E., Häyrinen, T., Kivi, A., Marchi, V., Gallen, A., Blom, S., Varhe, A., Kaartinen, N., Haataja, L. & Vanhatalo, S., 13 Jan 2020, In : Scientific Reports. 10, 1, 1 p.

    Research output: Contribution to journalArticleScientificpeer-review

  6. 2019
  7. Published

    Changes in hemodynamics associated with metabolic syndrome are more pronounced in women than in men

    Kangas, P., Tikkakoski, A., Kettunen, J., Eräranta, A., Huhtala, H., Kähönen, M., Sipilä, K., Mustonen, J. & Pörsti, I., 5 Dec 2019, In : Scientific Reports. 9, 1, 11 p., 18377.

    Research output: Contribution to journalArticleScientificpeer-review

  8. Published

    Automatic classification of IgA endomysial antibody test for celiac disease: a new method deploying machine learning

    Caetano dos Santos, F. L., Michalek, I. M., Laurila, K., Kaukinen, K., Hyttinen, J. & Lindfors, K., 1 Dec 2019, In : Scientific Reports. 9, 1, 9217.

    Research output: Contribution to journalArticleScientificpeer-review

  9. Published

    Genetic similarity of biological samples to counter bio-hacking of DNA-sequencing functionality

    Islam, M. S., Ivanov, S., Robson, E., Dooley-Cullinane, T., Coffey, L., Doolin, K. & Balasubramaniam, S., 1 Dec 2019, In : Scientific Reports. 9, 1, 8684.

    Research output: Contribution to journalArticleScientificpeer-review

  10. Published

    Multimodal Machine Learning-based Knee Osteoarthritis Progression Prediction from Plain Radiographs and Clinical Data

    Tiulpin, A., Klein, S., Bierma-Zeinstra, S. M. A., Thevenot, J., Rahtu, E., Meurs, J. V., Oei, E. H. G. & Saarakkala, S., 1 Dec 2019, In : Scientific Reports. 9, 1, 20038.

    Research output: Contribution to journalArticleScientificpeer-review

  11. Published

    Aerosol gas exchange system (AGES) for nanoparticle sampling at elevated temperatures: Modeling and experimental characterization

    Bainschab, M., Martikainen, S., Keskinen, J., Bergmann, A. & Karjalainen, P., 20 Nov 2019, In : Scientific Reports. 9, 1, 12 p., 17149.

    Research output: Contribution to journalArticleScientificpeer-review

  12. Published

    Highly ductile amorphous oxide at room temperature and high strain rate

    Frankberg, E. J., Kalikka, J., Ferré, F. G., Joly-Pottuz, L., Salminen, T., Hintikka, J., Hokka, M., Koneti, S., Douillard, T., Le Saint, B., Kreiml, P., Cordill, M. J., Epicier, T., Stauffer, D., Vanazzi, M., Roiban, L., Akola, J., Fonzo, F. D., Levänen, E. & Masenelli-Varlot, K., 15 Nov 2019, In : Science. 366, 6467, p. 864-869 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  13. Published

    Automatization and stress analysis data of CoCr laser weld fatigue tests

    Kanerva, M., Besharat, Z., Pärnänen, T., Jokinen, J., Honkanen, M., Sarlin, E., Göthelid, M. & Schlenzka, D., 1 Oct 2019, In : Data in Brief. 26, 104374.

    Research output: Contribution to journalArticleScientificpeer-review

  14. Published

    DroneRF dataset: A dataset of drones for RF-based detection, classification and identification

    Allahham, MHD. S., Al-Sa'd, M. F., Al-Ali, A., Mohamed, A., Khattab, T. & Erbad, A., 1 Oct 2019, In : Data in Brief. 26, 104313.

    Research output: Contribution to journalArticleScientificpeer-review

  15. Published

    Non-toxic printed supercapacitors operating in sub-zero conditions

    Railanmaa, A., Lehtimäki, S., Keskinen, J. & Lupo, D., 1 Oct 2019, In : Scientific Reports. 9, 1, 14059.

    Research output: Contribution to journalArticleScientificpeer-review

  16. Published

    Real-time characterization of spectral instabilities in a mode-locked fibre laser exhibiting soliton-similariton dynamics

    Lapre, C., Billet, C., Meng, F., Ryczkowski, P., Sylvestre, T., Finot, C., Genty, G. & Dudley, J. M., 27 Sep 2019, In : Scientific Reports. 9, 1

    Research output: Contribution to journalArticleScientificpeer-review

  17. Published

    Gaussian Light Model in Brightfield Optical Projection Tomography

    Koskela, O., Montonen, T., Belay, B., Figueiras, E., Pursiainen, S. & Hyttinen, J., 26 Sep 2019, In : Scientific Reports. 9, 1

    Research output: Contribution to journalArticleScientificpeer-review

  18. Published

    Scaling and correlation properties of RR and QT intervals at the cellular level

    Kim, J., Shah, D., Potapov, I., Latukka, J., Aalto-Setälä, K. & Räsänen, E., 2019, In : Scientific Reports. 9, 1, 3651.

    Research output: Contribution to journalArticleScientificpeer-review

  19. 2018
  20. Published

    Multicomponent new particle formation from sulfuric acid, ammonia, and biogenic vapors

    Lehtipalo, K., Yan, C., Dada, L., Bianchi, F., Xiao, M., Wagner, R., Stolzenburg, D., Ahonen, L. R., Amorim, A., Baccarini, A., Bauer, P. S., Baumgartner, B., Bergen, A., Bernhammer, A. K., Breitenlechner, M., Brilke, S., Buchholz, A., Mazon, S. B., Chen, D., Chen, X., Dias, A., Dommen, J., Draper, D. C., Duplissy, J., Ehn, M., Finkenzeller, H., Fischer, L., Frege, C., Fuchs, C., Garmash, O., Gordon, H., Hakala, J., He, X., Heikkinen, L., Heinritzi, M., Helm, J. C., Hofbauer, V., Hoyle, C. R., Jokinen, T., Kangasluoma, J., Kerminen, V. M., Kim, C., Kirkby, J., Kontkanen, J., Kürten, A., Lawler, M. J., Mai, H., Mathot, S., Nieminen, T. & Virtanen, A., 12 Dec 2018, In : Science Advances. 4, 12, eaau5363.

    Research output: Contribution to journalArticleScientificpeer-review

  21. Published

    An Optical Method for the In-Vivo Characterization of the Biomechanical Response of the Right Ventricle

    Soltani, A., Lahti, J., Järvelä, K., Curtze, S., Laurikka, J., Hokka, M. & Kuokkala, V. T., 1 Dec 2018, In : Scientific Reports. 8, 1, 6831.

    Research output: Contribution to journalArticleScientificpeer-review

  22. Published

    Automatic knee osteoarthritis diagnosis from plain radiographs: A deep learning-based approach

    Tiulpin, A., Thevenot, J., Rahtu, E., Lehenkari, P. & Saarakkala, S., 1 Dec 2018, In : Scientific Reports. 8, 1, 1727.

    Research output: Contribution to journalArticleScientificpeer-review

  23. Published

    Glucosylceramide modifies the LPS-induced inflammatory response in macrophages and the orientation of the LPS/TLR4 complex in silico

    Mobarak, E., Håversen, L., Manna, M., Rutberg, M., Levin, M., Perkins, R., Rog, T., Vattulainen, I. & Borén, J., 1 Dec 2018, In : Scientific Reports. 8, 1, 13600.

    Research output: Contribution to journalArticleScientificpeer-review

  24. Published

    Highly-Sensitive Refractive Index Sensing by Near-infrared Metatronic Nanocircuits

    Rashed, A. R., Gudulluoglu, B., Yun, H. W., Habib, M., Boyaci, I. H., Hong, S. H., Ozbay, E. & Caglayan, H., 1 Dec 2018, In : Scientific Reports. 8, 1, 11457.

    Research output: Contribution to journalArticleScientificpeer-review

  25. Published

    Information transfer in QT-RR dynamics: Application to QT-correction

    Potapov, I., Latukka, J., Kim, J., Luukko, P., Aalto-Setälä, K. & Räsänen, E., 1 Dec 2018, In : Scientific Reports. 8, 1, 9 p., 14992.

    Research output: Contribution to journalArticleScientificpeer-review

  26. Published

    In vitro Evaluation of Porous borosilicate, borophosphate and phosphate Bioactive Glasses Scaffolds fabricated using Foaming Agent for Bone Regeneration

    Erasmus, E. P., Sule, R., Johnson, O. T., Massera, J. & Sigalas, I., 1 Dec 2018, In : Scientific Reports. 8, 1, 3699.

    Research output: Contribution to journalArticleScientificpeer-review

  27. Published

    Multilayer Aggregation with Statistical Validation: Application to Investor Networks

    Baltakys, K., Kanniainen, J. & Emmert-Streib, F., 1 Dec 2018, In : Scientific Reports. 8, 1, 8198.

    Research output: Contribution to journalArticleScientificpeer-review

  28. Published

    Added value of autoregulation and multi-step kinetics of transcription initiation

    Prajapat, M. K. & Ribeiro, A. S., 1 Nov 2018, In : Royal Society Open Science. 5, 11, 181170.

    Research output: Contribution to journalArticleScientificpeer-review

  29. Published

    Redox-coupled quinone dynamics in the respiratory complex I

    Warnau, J., Sharma, V., Gamiz-Hernandez, A. P., Luca, A. D., Haapanen, O., Vattulainen, I., Wikström, M., Hummer, G. & Kaila, V. R. I., 4 Sep 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 36, p. E8413-E8420

    Research output: Contribution to journalArticleScientificpeer-review

  30. Published

    Optimized dispersion quality of aqueous carbon nanotube colloids as a function of sonochemical yield and surfactant/CNT ratio

    Keinänen, P., Siljander, S., Koivula, M., Sethi, J., Sarlin, E., Vuorinen, J. & Kanerva, M., 1 Sep 2018, In : Heliyon. 4, 9, 15 p., e00787.

    Research output: Contribution to journalArticleScientificpeer-review

  31. Published

    Porous poly-L-lactide-co-1-caprolactone scaffold: A novel biomaterial for vaginal tissue engineering

    Sartoneva, R., Kuismanen, K., Juntunen, M., Karjalainen, S., Hannula, M., Kyllönen, L., Hyttinen, J., Huhtala, H., Paakinaho, K. & Miettinen, S., 1 Aug 2018, In : Royal Society Open Science. 5, 8, 180811.

    Research output: Contribution to journalArticleScientificpeer-review

  32. Published

    Comparison of electron injection and recombination on TiO2 nanoparticles and ZnO nanorods photosensitized by phthalocyanine

    Virkki, K., Tervola, E., Ince, M., Torres, T. & Tkachenko, N. V., 11 Jul 2018, In : Royal Society Open Science. 5, 7, 180323.

    Research output: Contribution to journalArticleScientificpeer-review

  33. Published

    Ricci-flow based conformal mapping of the proximal femur to identify exercise loading effects

    Narra, N., Abe, S., Dimitrov, V., Nikander, R., Kouhia, R., Sievänen, H. & Hyttinen, J., 2018, In : Scientific Reports. 8, 1, 4823.

    Research output: Contribution to journalArticleScientificpeer-review

  34. Published

    Sub-parts-per-trillion level sensitivity in trace gas detection by cantilever-enhanced photo-acoustic spectroscopy

    Tomberg, T., Vainio, M., Hieta, T. & Halonen, L., 2018, In : Scientific Reports. 8, 1, 1848.

    Research output: Contribution to journalArticleScientificpeer-review

  35. 2017
  36. Published

    Speeding up crystallization

    Akola, J. & Jones, R. O., 15 Dec 2017, In : Science. 358, 6369, p. 1386 1 p.

    Research output: Contribution to journalReview ArticleScientificpeer-review

  37. Published

    Chromatin organization regulates viral egress dynamics

    Aho, V., Myllys, M., Ruokolainen, V., Hakanen, S., Mäntylä, E., Virtanen, J., Hukkanen, V., Kühn, T., Timonen, J., Mattila, K., Larabell, C. A. & Vihinen-Ranta, M., 1 Dec 2017, In : Scientific Reports. 7, 1, 3692.

    Research output: Contribution to journalArticleScientificpeer-review

  38. Published

    Curved optical solitons subject to transverse acceleration in reorientational soft matter

    Laudyn, U. A., Kwaśny, M., Sala, F. A., Karpierz, M. A., Smyth, N. F. & Assanto, G., 1 Dec 2017, In : Scientific Reports. 7, 1, 12385.

    Research output: Contribution to journalArticleScientificpeer-review

  39. Published

    Effects of Sintering Temperature on Crystallization and Fabrication of Porous Bioactive Glass Scaffolds for Bone Regeneration

    Erasmus, E. P., Johnson, O. T., Sigalas, I. & Massera, J., 1 Dec 2017, In : Scientific Reports. 7, 1, 6046.

    Research output: Contribution to journalArticleScientificpeer-review

  40. Published

    Molecular mechanisms of Charcot-Marie-Tooth neuropathy linked to mutations in human myelin protein P2

    Ruskamo, S., Nieminen, T., Kristiansen, C. K., Vatne, G. H., Baumann, A., Hallin, E. I., Raasakka, A., Joensuu, P., Bergmann, U., Vattulainen, I. & Kursula, P., 1 Dec 2017, In : Scientific Reports. 7, 1, 6510.

    Research output: Contribution to journalArticleScientificpeer-review

  41. Published

    Personalized Monitoring and Advance Warning System for Cardiac Arrhythmias

    Kiranyaz, S., Ince, T. & Gabbouj, M., 1 Dec 2017, In : Scientific Reports. 7, 1, 9270.

    Research output: Contribution to journalArticleScientificpeer-review

  42. Published

    Rate-limiting steps in transcription dictate sensitivity to variability in cellular components

    Mäkelä, J., Kandavalli, V. & Ribeiro, A. S., 1 Dec 2017, In : Scientific Reports. 7, 1, 10588.

    Research output: Contribution to journalArticleScientificpeer-review

  43. Published

    Sensitivity enhancement of flexible gas sensors via conversion of inkjet-printed silver electrodes into porous gold counterparts

    Fang, Y., Akbari, M., Sydänheimo, L., Ukkonen, L. & Tentzeris, M. M., 1 Dec 2017, In : Scientific Reports. 7, 1, 8988.

    Research output: Contribution to journalArticleScientificpeer-review

  44. Published

    Mechanistic principles underlying regulation of the actin cytoskeleton by phosphoinositides

    Senju, Y., Kalimeri, M., Koskela, E. V., Somerharju, P., Zhao, H., Vattulainen, I. & Lappalainen, P., 24 Oct 2017, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 43, p. E8977-E8986

    Research output: Contribution to journalArticleScientificpeer-review

  45. Published

    Traffic is a major source of atmospheric nanocluster aerosol

    Rönkkö, T., Kuuluvainen, H., Karjalainen, P., Keskinen, J., Hillamo, R., Niemi, J. V., Pirjola, L., Timonen, H. J., Saarikoski, S., Saukko, E., Järvinen, A., Silvennoinen, H., Rostedt, A., Olin, M., Yli-Ojanperä, J., Nousiainen, P., Kousa, A. & Dal Maso, M., 18 Jul 2017, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 29, p. 7549-7554 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  46. Published

    Väitöstilaisuus yliopiston imagonluojana

    Katko, T. S., May 2017, In : Tiedepolitiikka. 42, 1, p. 63-64 2 p.

    Research output: Contribution to journalComment/debateScientific

  47. Published

    Analysis of spatial heterogeneity in normal epithelium and preneoplastic alterations in mouse prostate tumor models

    Valkonen, M., Ruusuvuori, P., Kartasalo, K., Nykter, M., Visakorpi, T. & Latonen, L., 20 Mar 2017, In : Scientific Reports. 7, 44831.

    Research output: Contribution to journalArticleScientificpeer-review

  48. Published

    Infiltrated bunch of solitons in Bi-doped frequency-shifted feedback fibre laser operated at 1450 nm

    Rissanen, J., Korobko, D. A., Zolotovsky, I. O., Melkumov, M., Khopin, V. F. & Gumenyuk, R., 10 Mar 2017, In : Scientific Reports. 7, 44194.

    Research output: Contribution to journalArticleScientificpeer-review

  49. 2016
  50. Published

    Surface-Enhanced Impulsive Coherent Vibrational Spectroscopy

    Du, J., Harra, J., Virkki, M., Mäkelä, J. M., Leng, Y., Kauranen, M. & Kobayashi, T., 4 Nov 2016, In : Scientific Reports. 6, 36471.

    Research output: Contribution to journalArticleScientificpeer-review

  51. Published

    Trends for isolated amino acids and dipeptides: Conformation, divalent ion binding, and remarkable similarity of binding to calcium and lead

    Ropo, M., Blum, V. & Baldauf, C., 3 Nov 2016, In : Scientific Reports. 6, 35772.

    Research output: Contribution to journalArticleScientificpeer-review

  52. Published

    Atomistic determinants of co-enzyme Q reduction at the Qi-site of the cytochrome bc1 complex

    Postila, P. A., Kaszuba, K., Kuleta, P., Vattulainen, I., Sarewicz, M., Osyczka, A. & Róg, T., 26 Sep 2016, In : Scientific Reports. 6, 33607.

    Research output: Contribution to journalArticleScientificpeer-review

  53. Published

    Brain hemodynamic activity during viewing and re-viewing of comedy movies explained by experienced humor

    Jääskeläinen, I. P., Pajula, J., Tohka, J., Lee, H. J., Kuo, W. J. & Lin, F. H., 21 Jun 2016, In : Scientific Reports. 6, 27741.

    Research output: Contribution to journalArticleScientificpeer-review

  54. Lower bound for the spatial extent of localized modes in photonic-crystal waveguides with small random imperfections

    Faggiani, R., Baron, A., Zang, X., Lalouat, L., Schulz, S. A., O'Regan, B., Vynck, K., Cluzel, B., De Fornel, F., Krauss, T. F. & Lalanne, P., 1 Jun 2016, In : Scientific Reports. 6, 27037.

    Research output: Contribution to journalArticleScientificpeer-review

  55. Published

    1700 nm dispersion managed mode-locked bismuth fiber laser

    Noronen, T., Firstov, S., Dianov, E. & Okhotnikov, O. G., 21 Apr 2016, In : Scientific Reports. 6, 24876.

    Research output: Contribution to journalArticleScientificpeer-review

Previous 1 2 Next