Tampere University of Technology

TUTCRIS Research Portal

Publications

  1. 2019
  2. Published

    Iterative unsupervised domain adaptation for generalized cell detection from brightfield z-stacks

    Liimatainen, K., Kananen, L., Latonen, L. & Ruusuvuori, P., 15 Feb 2019, In : BMC Bioinformatics. 20, 1, 80.

    Research output: Contribution to journalArticleScientificpeer-review

  3. Published

    Regulation of asymmetries in the kinetics and protein numbers of bacterial gene expression

    Startceva, S., Kandavalli, V. K., Visa, A. & Ribeiro, A. S., 1 Feb 2019, In : Biochimica et Biophysica Acta - Gene Regulatory Mechanisms. 1862, 2, p. 119-128 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  4. 2018
  5. Published

    SCIP: a single-cell image processor toolbox

    Martins, L., Neeli-Venkata, R., Oliveira, S. M. D., Häkkinen, A., Ribeiro, A. S. & Fonseca, J. M., 15 Dec 2018, In : Bioinformatics. 34, 24, p. 4318-4320 3 p.

    Research output: Contribution to journalArticleScientificpeer-review

  6. Published

    Assessment of mutation probabilities of KRAS G12 missense mutants and their long-timescale dynamics by atomistic molecular simulations and Markov state modeling

    Pantsar, T., Rissanen, S., Dauch, D., Laitinen, T., Vattulainen, I. & Poso, A., 10 Sep 2018, In : PLoS Computational Biology. 14, 9, e1006458.

    Research output: Contribution to journalArticleScientificpeer-review

  7. Published

    Comparative analysis of tissue reconstruction algorithms for 3D histology

    Kartasalo, K., Latonen, L., Vihinen, J., Visakorpi, T., Nykter, M. & Ruusuvuori, P., 1 Sep 2018, In : Bioinformatics. 34, 17, p. 3013-3021 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  8. Published

    Effect of surfactant type and sonication energy on the electrical conductivity properties of nanocellulose-CNT nanocomposite films

    Siljander, S., Keinänen, P., Räty, A., Ramakrishnan, K. R., Tuukkanen, S., Kunnari, V., Harlin, A., Vuorinen, J. & Kanerva, M., 20 Jun 2018, In : International Journal of Molecular Sciences. 19, 6, 1819.

    Research output: Contribution to journalArticleScientificpeer-review

  9. Published

    The precision of the symmetry in Z-ring placement in Escherichia coli is hampered at critical temperatures

    Neeli-Venkata, R., Oliveira, S. M. D., Martins, L., Startceva, S., Bahrudeen, M., Fonseca, J. M., Minoia, M. & Ribeiro, A. S., 18 May 2018, In : Physical Biology. 15, 5, 056002.

    Research output: Contribution to journalArticleScientificpeer-review

  10. Published

    A review of connectivity map and computational approaches in pharmacogenomics

    Musa, A., Ghoraie, L. S., Zhang, S. D., Glazko, G., Yli-Harja, O., Dehmer, M., Haibe-Kains, B. & Emmert-Streib, F., 1 May 2018, In : Briefings in Bioinformatics. 19, 3, p. 506-523 18 p.

    Research output: Contribution to journalArticleScientificpeer-review

  11. Published

    Molecular mechanism for inhibition of twinfilin by phosphoinositides

    Hakala, M., Kalimeri, M., Enkavi, G., Vattulainen, I. & Lappalainen, P., 1 Jan 2018, In : Journal of Biological Chemistry. 293, 13, p. 4818-4829 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  12. Published

    Archaea are prominent members of the prokaryotic communities colonizing common forest mushrooms

    Rinta-Kanto, J. M., Pehkonen, K., Sinkko, H., Tamminen, M. V. & Timonen, S., 2018, In : Canadian Journal of Microbiology. 64, 10, p. 716-726 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

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