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Genetic and QTL analyses of yield and a set of physiological traits in pepper

Tutkimustuotosvertaisarvioitu

Standard

Genetic and QTL analyses of yield and a set of physiological traits in pepper. / Alimi, N. A.; Bink, M. C A M; Dieleman, J. A.; Nicolaï, M.; Wubs, M.; Heuvelink, E.; Magan, J.; Voorrips, R. E.; Jansen, J.; Rodrigues, P. C.; van der Heijden, G. W A M; Vercauteren, A.; Vuylsteke, M.; Song, Y.; Glasbey, C.; Barocsi, A.; Lefebvre, V.; Palloix, A.; van Eeuwijk, F. A.

julkaisussa: EUPHYTICA, Vuosikerta 190, Nro 2, 2013, s. 181-201.

Tutkimustuotosvertaisarvioitu

Harvard

Alimi, NA, Bink, MCAM, Dieleman, JA, Nicolaï, M, Wubs, M, Heuvelink, E, Magan, J, Voorrips, RE, Jansen, J, Rodrigues, PC, van der Heijden, GWAM, Vercauteren, A, Vuylsteke, M, Song, Y, Glasbey, C, Barocsi, A, Lefebvre, V, Palloix, A & van Eeuwijk, FA 2013, 'Genetic and QTL analyses of yield and a set of physiological traits in pepper', EUPHYTICA, Vuosikerta. 190, Nro 2, Sivut 181-201. https://doi.org/10.1007/s10681-012-0767-0

APA

Alimi, N. A., Bink, M. C. A. M., Dieleman, J. A., Nicolaï, M., Wubs, M., Heuvelink, E., ... van Eeuwijk, F. A. (2013). Genetic and QTL analyses of yield and a set of physiological traits in pepper. EUPHYTICA, 190(2), 181-201. https://doi.org/10.1007/s10681-012-0767-0

Vancouver

Alimi NA, Bink MCAM, Dieleman JA, Nicolaï M, Wubs M, Heuvelink E et al. Genetic and QTL analyses of yield and a set of physiological traits in pepper. EUPHYTICA. 2013;190(2):181-201. https://doi.org/10.1007/s10681-012-0767-0

Author

Alimi, N. A. ; Bink, M. C A M ; Dieleman, J. A. ; Nicolaï, M. ; Wubs, M. ; Heuvelink, E. ; Magan, J. ; Voorrips, R. E. ; Jansen, J. ; Rodrigues, P. C. ; van der Heijden, G. W A M ; Vercauteren, A. ; Vuylsteke, M. ; Song, Y. ; Glasbey, C. ; Barocsi, A. ; Lefebvre, V. ; Palloix, A. ; van Eeuwijk, F. A. / Genetic and QTL analyses of yield and a set of physiological traits in pepper. Julkaisussa: EUPHYTICA. 2013 ; Vuosikerta 190, Nro 2. Sivut 181-201.

Bibtex - Lataa

@article{30382cfe4421415eb6bc1752ef75dd20,
title = "Genetic and QTL analyses of yield and a set of physiological traits in pepper",
abstract = "An interesting strategy for improvement of a complex trait dissects the complex trait in a number of physiological component traits, with the latter having hopefully a simple genetic basis. The complex trait is then improved via improvement of its component traits. As first part of such a strategy to improve yield in pepper, we present genetic and QTL analyses for four pepper experiments. Sixteen traits were analysed for a population of 149 recombinant inbred lines, obtained from a cross between the large-fruited pepper cultivar 'Yolo Wonder' (YW) and the small fruited pepper 'Criollo de Morelos 334' (CM334). The marker data consisted of 493 markers assembled into 17 linkage groups covering 1,775 cM. The trait distributions were unimodal, although sometimes skewed. Many traits displayed heterosis and transgression. Heritabilities were high (mean 0.86, with a range between 0.43 and 0.96). A multiple QTL mapping approach per trait and environment yielded 24 QTLs. The average numbers of QTLs per trait was two, ranging between zero and six. The total explained trait variance by QTLs varied between 9 and 61 {\%}. QTL effects differed quantitatively between environments, but not qualitatively. For stem-related traits, the trait-increasing QTL alleles came from parent CM334, while for leaf and fruit related traits the increasing QTL alleles came from parent YW. The QTLs on linkage groups 1b, 2, 3a, 4, 6 and 12 showed pleiotropic effects with patterns that were consistent with the genetic correlations. These results contribute to a better understanding of the genetics of yield-related physiological traits in pepper and represent a first step in the improvement of the target trait yield.",
keywords = "Capsicum annuum, Complex trait, Component trait, Dissection, Genetic Correlation, Pleiotropy",
author = "Alimi, {N. A.} and Bink, {M. C A M} and Dieleman, {J. A.} and M. Nicola{\"i} and M. Wubs and E. Heuvelink and J. Magan and Voorrips, {R. E.} and J. Jansen and Rodrigues, {P. C.} and {van der Heijden}, {G. W A M} and A. Vercauteren and M. Vuylsteke and Y. Song and C. Glasbey and A. Barocsi and V. Lefebvre and A. Palloix and {van Eeuwijk}, {F. A.}",
year = "2013",
doi = "10.1007/s10681-012-0767-0",
language = "English",
volume = "190",
pages = "181--201",
journal = "EUPHYTICA",
issn = "0014-2336",
publisher = "Springer Verlag",
number = "2",

}

RIS (suitable for import to EndNote) - Lataa

TY - JOUR

T1 - Genetic and QTL analyses of yield and a set of physiological traits in pepper

AU - Alimi, N. A.

AU - Bink, M. C A M

AU - Dieleman, J. A.

AU - Nicolaï, M.

AU - Wubs, M.

AU - Heuvelink, E.

AU - Magan, J.

AU - Voorrips, R. E.

AU - Jansen, J.

AU - Rodrigues, P. C.

AU - van der Heijden, G. W A M

AU - Vercauteren, A.

AU - Vuylsteke, M.

AU - Song, Y.

AU - Glasbey, C.

AU - Barocsi, A.

AU - Lefebvre, V.

AU - Palloix, A.

AU - van Eeuwijk, F. A.

PY - 2013

Y1 - 2013

N2 - An interesting strategy for improvement of a complex trait dissects the complex trait in a number of physiological component traits, with the latter having hopefully a simple genetic basis. The complex trait is then improved via improvement of its component traits. As first part of such a strategy to improve yield in pepper, we present genetic and QTL analyses for four pepper experiments. Sixteen traits were analysed for a population of 149 recombinant inbred lines, obtained from a cross between the large-fruited pepper cultivar 'Yolo Wonder' (YW) and the small fruited pepper 'Criollo de Morelos 334' (CM334). The marker data consisted of 493 markers assembled into 17 linkage groups covering 1,775 cM. The trait distributions were unimodal, although sometimes skewed. Many traits displayed heterosis and transgression. Heritabilities were high (mean 0.86, with a range between 0.43 and 0.96). A multiple QTL mapping approach per trait and environment yielded 24 QTLs. The average numbers of QTLs per trait was two, ranging between zero and six. The total explained trait variance by QTLs varied between 9 and 61 %. QTL effects differed quantitatively between environments, but not qualitatively. For stem-related traits, the trait-increasing QTL alleles came from parent CM334, while for leaf and fruit related traits the increasing QTL alleles came from parent YW. The QTLs on linkage groups 1b, 2, 3a, 4, 6 and 12 showed pleiotropic effects with patterns that were consistent with the genetic correlations. These results contribute to a better understanding of the genetics of yield-related physiological traits in pepper and represent a first step in the improvement of the target trait yield.

AB - An interesting strategy for improvement of a complex trait dissects the complex trait in a number of physiological component traits, with the latter having hopefully a simple genetic basis. The complex trait is then improved via improvement of its component traits. As first part of such a strategy to improve yield in pepper, we present genetic and QTL analyses for four pepper experiments. Sixteen traits were analysed for a population of 149 recombinant inbred lines, obtained from a cross between the large-fruited pepper cultivar 'Yolo Wonder' (YW) and the small fruited pepper 'Criollo de Morelos 334' (CM334). The marker data consisted of 493 markers assembled into 17 linkage groups covering 1,775 cM. The trait distributions were unimodal, although sometimes skewed. Many traits displayed heterosis and transgression. Heritabilities were high (mean 0.86, with a range between 0.43 and 0.96). A multiple QTL mapping approach per trait and environment yielded 24 QTLs. The average numbers of QTLs per trait was two, ranging between zero and six. The total explained trait variance by QTLs varied between 9 and 61 %. QTL effects differed quantitatively between environments, but not qualitatively. For stem-related traits, the trait-increasing QTL alleles came from parent CM334, while for leaf and fruit related traits the increasing QTL alleles came from parent YW. The QTLs on linkage groups 1b, 2, 3a, 4, 6 and 12 showed pleiotropic effects with patterns that were consistent with the genetic correlations. These results contribute to a better understanding of the genetics of yield-related physiological traits in pepper and represent a first step in the improvement of the target trait yield.

KW - Capsicum annuum

KW - Complex trait

KW - Component trait

KW - Dissection

KW - Genetic Correlation

KW - Pleiotropy

UR - http://www.scopus.com/inward/record.url?scp=84874812566&partnerID=8YFLogxK

U2 - 10.1007/s10681-012-0767-0

DO - 10.1007/s10681-012-0767-0

M3 - Article

VL - 190

SP - 181

EP - 201

JO - EUPHYTICA

JF - EUPHYTICA

SN - 0014-2336

IS - 2

ER -